Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL670379.8-201ENST00000605353 252 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AL670379.7-201ENST00000605823 252 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AL450472.3-201ENST00000615578 367 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC244517.12-201ENST00000623581 663 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC025031.4-201ENST00000621248 3271 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AL450326.2-201ENST00000421913 1962 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 AC087190.4-201ENST00000574616 8334 ntBASIC4.45□□□□□ -1.7
TRIM48Q8IWZ4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC139713.2-214ENST00000642059 1811 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.146-201ENST00000363549 102 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.422-201ENST00000384054 114 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 SNORD70.1-201ENST00000391007 85 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RNA5SP111-201ENST00000411386 101 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 BX682237.1-201ENST00000415016 335 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AL137014.1-201ENST00000420490 1226 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RPL7AP25-201ENST00000423357 805 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RPL18P10-201ENST00000425606 538 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 CKS1BP5-201ENST00000434172 273 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 FABP5P14-201ENST00000437273 393 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 CYCSP43-201ENST00000438233 310 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RPL23AP33-201ENST00000442301 452 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RPL32P28-201ENST00000443577 397 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RPL30P15-201ENST00000457129 321 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-685P-201ENST00000517088 95 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC135001.1-201ENST00000544546 283 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC106782.4-201ENST00000568264 210 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC138761.3-201ENST00000579993 334 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC019193.3-201ENST00000609144 554 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 MIR6798-201ENST00000612887 67 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC012409.4-201ENST00000612923 249 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 RAD17P1-201ENST00000418130 2042 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.44□□□□□ -1.7
TRIM48Q8IWZ4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 SNORA23-201ENST00000365128 182 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 SNORA22B-201ENST00000383876 138 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 SNORD96B-201ENST00000386148 79 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 MIR450B-201ENST00000401182 78 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL139039.1-201ENST00000401900 692 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL592291.1-201ENST00000403830 352 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-387P-201ENST00000411331 105 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL139095.3-201ENST00000419672 1203 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC016712.1-201ENST00000431088 378 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RPL21P112-201ENST00000434403 463 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC004866.2-201ENST00000438285 481 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RPL23AP89-201ENST00000439324 255 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL590399.6-201ENST00000446396 307 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 PTMAP3-201ENST00000447474 330 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 TPT1P12-201ENST00000448968 492 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RPS11P1-201ENST00000451072 473 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RNU7-152P-201ENST00000458982 64 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC008694.2-201ENST00000517591 306 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 DNAJC8P1-201ENST00000554535 372 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms