Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTND3P3-201ENST00000505004 126 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC026801.2-201ENST00000515352 425 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 COX6CP8-201ENST00000522620 226 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC023813.2-201ENST00000564321 469 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC107075.1-201ENST00000613695 314 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC079228.1-201ENST00000624774 1049 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC116618.1-201ENST00000634617 774 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 Y_RNA.311-201ENST00000365068 96 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 RNU1-100P-201ENST00000365255 165 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 MIR1284-201ENST00000408337 120 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC234781.2-201ENST00000426370 994 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 ATP5F1P1-201ENST00000433775 569 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 MTND5P14-201ENST00000441481 1267 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 CACYBPP2-201ENST00000453625 678 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 MTND2P39-201ENST00000457230 764 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC005410.1-202ENST00000460347 485 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC126182.1-201ENST00000478134 357 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 KC877373.1-201ENST00000479066 408 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 FAM172BP-201ENST00000487497 1089 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 RPL30P5-201ENST00000494923 336 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC079395.1-201ENST00000510981 262 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 HMGB1P41-201ENST00000520234 440 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AP001269.3-201ENST00000588718 329 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC013553.2-201ENST00000604244 589 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 YPEL5P2-201ENST00000605553 359 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AL445984.1-201ENST00000637834 659 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AC087359.1-201ENST00000508335 1740 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 AP000526.1-201ENST00000603308 1388 ntBASIC2.61□□□□□ -1.99
NUDCD3Q8IVD9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 OR4G2P-202ENST00000641004 1759 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 RNU5E-8P-201ENST00000363502 116 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 Y_RNA.192-201ENST00000363977 102 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AL138885.1-201ENST00000405921 675 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 TAAR7P-201ENST00000436141 242 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AL671855.1-201ENST00000446875 1203 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 MTND1P31-201ENST00000449206 961 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC027673.1-201ENST00000456245 405 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 SNORD121B-201ENST00000458838 81 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 RPS27P27-201ENST00000498779 255 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC021146.8-201ENST00000507455 733 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 CDC42P4-201ENST00000510507 563 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 TTC39CP1-201ENST00000512513 755 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC007954.1-201ENST00000554198 494 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 MIR5195-201ENST00000583555 115 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC012493.2-201ENST00000595083 291 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AL162274.2-201ENST00000614406 332 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 AC109809.1-201ENST00000619665 545 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 TPTE2P4-201ENST00000258589 1605 ntBASIC2.6□□□□□ -1.99
NUDCD3Q8IVD9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms