Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 CR383658.2-201ENST00000547576 1525 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC004972.1-201ENST00000623934 2209 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RNA5SP197-201ENST00000363357 119 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RNU5F-7P-201ENST00000363696 115 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RNA5SP252-201ENST00000391131 119 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 EI24P2-201ENST00000397776 1076 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RN7SKP140-201ENST00000411196 284 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 BX323014.1-201ENST00000412876 237 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RPL21P24-201ENST00000413752 448 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RPS27AP14-201ENST00000422868 454 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC007919.1-201ENST00000429380 217 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 MTCO3P45-201ENST00000443036 613 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC125238.1-201ENST00000448842 249 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC104472.2-201ENST00000469035 601 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 RPL23AP41-201ENST00000484754 458 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 OR2A20P-203ENST00000498397 1268 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC111000.2-201ENST00000507775 550 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC107934.2-201ENST00000518653 310 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AL133153.1-201ENST00000557756 303 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC008751.2-201ENST00000597885 980 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AL353778.1-201ENST00000603149 408 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 OR10AB1P-201ENST00000609613 938 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC092628.2-201ENST00000622492 339 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC092192.1-201ENST00000633154 1018 ntBASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF39Q86UA1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 Z83843.1-201ENST00000604070 3685 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 SNORA14A-201ENST00000364773 135 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 MIR19A-201ENST00000384878 82 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RNA5SP293-201ENST00000410527 113 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC126124.2-201ENST00000413542 321 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC245291.1-201ENST00000419501 328 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 MTND4P20-201ENST00000424125 869 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC091390.3-201ENST00000426478 338 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC005300.1-201ENST00000428401 373 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RPL37P21-201ENST00000435890 276 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC008264.1-201ENST00000447612 367 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 MTCO1P42-201ENST00000457379 726 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RNU6-420P-201ENST00000458780 107 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 MTCYBP35-201ENST00000503630 1137 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RNU6-1129P-201ENST00000515964 104 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 SNORA64.4-201ENST00000516632 81 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AP002748.2-201ENST00000528671 348 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC005476.1-201ENST00000554427 397 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 MTCYBP22-201ENST00000603788 447 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC005183.1-201ENST00000603687 1979 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 AC233263.6-201ENST00000631132 1963 ntBASIC3.43□□□□□ -1.86
PRPF39Q86UA1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 AC007785.2-201ENST00000598627 1916 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 BX890604.2-201ENST00000427883 474 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 LARP1BP3-201ENST00000437229 869 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 AC006028.1-201ENST00000438379 402 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 CYCSP32-201ENST00000440548 321 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 CBWD4P-201ENST00000445695 655 ntBASIC3.42□□□□□ -1.86
PRPF39Q86UA1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF39Q86UA1 AC055855.1-201ENST00000489563 579 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms