Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC125611.1-201ENST00000549563 229 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 EEF1B2P4-201ENST00000551398 348 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC245036.5-201ENST00000596330 847 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC006254.3-201ENST00000603353 884 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC009159.1-201ENST00000618386 642 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 MTCO1P23-201ENST00000415223 1526 ntBASIC3.54□□□□□ -1.84
NPHP3Q7Z494 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP3Q7Z494 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 RNU6-1214P-201ENST00000363650 109 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 RNU4-26P-201ENST00000410270 107 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC010099.3-201ENST00000423896 409 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 POU5F1P7-201ENST00000508759 541 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC109445.1-201ENST00000512356 383 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 SLC2A13P1-201ENST00000531560 322 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 OR4K7P-201ENST00000580232 945 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 MIR3605-201ENST00000583214 100 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 MIR4635-201ENST00000583759 79 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC078899.3-201ENST00000599065 212 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC069304.2-201ENST00000605154 435 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 Z99289.3-201ENST00000605586 594 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC055876.5-201ENST00000605667 259 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AL139418.1-201ENST00000613613 177 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC006020.1-201ENST00000420179 1854 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 AC108206.1-201ENST00000570186 4159 ntBASIC3.53□□□□□ -1.84
NPHP3Q7Z494 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPHP3Q7Z494 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 Y_RNA.311-201ENST00000365068 96 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 RNU6-157P-201ENST00000383957 107 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 MIR506-201ENST00000384998 124 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 MTCO2P21-201ENST00000419780 677 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC079780.1-201ENST00000428259 207 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC092427.1-201ENST00000439177 601 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 MTND2P19-201ENST00000449129 1012 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 HMGB1P25-201ENST00000468402 607 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC006390.1-201ENST00000508068 283 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC010587.2-201ENST00000511727 448 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC026412.2-201ENST00000512270 1075 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 Y_RNA.676-201ENST00000516393 96 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 RNA5SP468-201ENST00000516782 93 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC023050.2-201ENST00000544968 387 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 SNORD84-203ENST00000584275 78 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC012669.1-201ENST00000603209 283 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 TUSC7.1-201ENST00000610969 165 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC008147.4-201ENST00000617570 1204 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 Z99129.2-201ENST00000619967 314 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 AC091925.2-201ENST00000625059 256 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP3Q7Z494 MTND4P34-201ENST00000572715 1371 ntBASIC3.52□□□□□ -1.85
NPHP3Q7Z494 MAPK10-362ENST00000641864 4484 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 SNORD113-6-201ENST00000363345 75 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 RNU6-1074P-201ENST00000383995 104 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 RNU2-15P-201ENST00000410692 191 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC007390.1-201ENST00000415722 356 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC005005.2-201ENST00000420779 380 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 OR2B8P-201ENST00000432841 938 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 MTND1P32-201ENST00000433043 938 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 HMGN2P3-201ENST00000433603 273 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.51□□□□□ -1.85
NPHP3Q7Z494 HMGN2P5-201ENST00000436882 273 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 RPL39P6-201ENST00000448289 150 ntBASIC3.51□□□□□ -1.85
NPHP3Q7Z494 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms