Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 AL590229.1-201ENST00000603497 542 ntBASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 AC007656.2-201ENST00000624902 4547 ntBASIC3.26□□□□□ -1.89
NUP54Q7Z3B4 MTND4P4-201ENST00000439033 1366 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AL138713.1-201ENST00000624026 2130 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 RNU4-21P-201ENST00000362802 126 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 SNORD116-2-201ENST00000384274 95 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 RNU6-809P-201ENST00000384461 107 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 SNORD116-6-201ENST00000384711 96 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 RN7SKP111-201ENST00000410349 271 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 HMGN1P24-201ENST00000412282 298 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 RPL23AP82-202ENST00000427528 469 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC244035.1-201ENST00000430042 390 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC073063.1-201ENST00000434352 607 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 TAAR7P-201ENST00000436141 242 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC092641.1-201ENST00000440229 772 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC118469.1-201ENST00000442943 488 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 VN1R34P-201ENST00000447387 883 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 TPT1P14-201ENST00000448018 505 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC010099.1-201ENST00000455434 375 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC116337.2-201ENST00000477662 156 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC055855.1-201ENST00000489563 579 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC114967.1-201ENST00000504890 259 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 SNORA31.22-201ENST00000517204 135 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 OR5B10P-201ENST00000532869 642 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC110760.3-201ENST00000598794 467 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC004067.1-201ENST00000608733 700 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC093838.1-201ENST00000613014 469 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AL161629.2-201ENST00000615347 275 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC019226.1-201ENST00000625666 515 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 CU459211.1-201ENST00000635667 749 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 MFSD8-236ENST00000641509 4050 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC022336.2-201ENST00000568966 2538 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 DDX10P1-201ENST00000448545 1933 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 AC010680.1-201ENST00000590024 3590 ntBASIC3.25□□□□□ -1.89
NUP54Q7Z3B4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC008669.1-201ENST00000565823 2178 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RNU6-223P-201ENST00000362830 107 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RNU6-432P-201ENST00000384196 109 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 SNORD115.1-201ENST00000391109 76 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RPS20P2-201ENST00000402520 389 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RPL7P25-201ENST00000404151 721 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC078974.1-201ENST00000411597 223 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC068533.1-201ENST00000418542 415 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 CYCSP46-201ENST00000423569 204 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 COX6CP12-201ENST00000446748 202 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RN7SL601P-201ENST00000471221 293 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC135721.1-201ENST00000497954 479 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC112204.1-201ENST00000502591 103 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 SNORA70.18-201ENST00000516696 98 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 RNU6-201P-201ENST00000517100 61 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AL133271.1-201ENST00000538229 291 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms