Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC0.91□□□□□ -2.26
UBR4Q5T4S7 USP9YP10-201ENST00000454868 628 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 RNU6-717P-201ENST00000459076 104 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 COX6CP14-201ENST00000469580 174 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 RNY1P9-201ENST00000532431 109 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
UBR4Q5T4S7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 SNORD95.1-201ENST00000364099 68 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 MIR329-2-201ENST00000385029 84 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 RPL23AP48-201ENST00000406913 488 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.91□□□□□ -2.26
UBR4Q5T4S7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC0.91□□□□□ -2.26
UBR4Q5T4S7 SNORA48.9-201ENST00000516419 162 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 BMS1P7-201ENST00000602440 1052 ntBASIC0.91□□□□□ -2.26
UBR4Q5T4S7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 AL161651.1-201ENST00000440882 223 ntBASIC0.9□□□□□ -2.26
UBR4Q5T4S7 AC055876.1-202ENST00000567053 138 ntBASIC0.9□□□□□ -2.26
UBR4Q5T4S7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.26
UBR4Q5T4S7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
UBR4Q5T4S7 DEFA7P-201ENST00000382676 285 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 SNORA48.3-201ENST00000391081 134 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 UBE2V2P1-201ENST00000434717 398 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 TPMTP1-201ENST00000592307 737 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 AC013562.2-201ENST00000611632 603 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 ZNF37BP-203ENST00000452306 1352 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 VPS26BP1-201ENST00000417155 755 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 HMGB1P9-201ENST00000429856 646 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 COX6CP12-201ENST00000446748 202 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 FAM106CP-201ENST00000582212 507 ntBASIC0.9□□□□□ -2.27
UBR4Q5T4S7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.9□□□□□ -2.27
UBR4Q5T4S7 AL021368.2-201ENST00000606125 5352 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 SNORA4.3-201ENST00000365564 137 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 HMGN2P19-201ENST00000425149 265 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 MTCYBP18-201ENST00000501056 747 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AK3P2-201ENST00000507976 429 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 PDCL2P2-201ENST00000533651 189 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 MIR222-201ENST00000384992 110 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AL159169.1-201ENST00000421119 127 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 CR848007.2-201ENST00000424918 787 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 LAMTOR5P1-201ENST00000444290 270 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC233702.1-201ENST00000482905 502 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC018437.1-201ENST00000492214 406 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 GZMAP1-201ENST00000503054 631 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 RNU1-92P-201ENST00000517017 135 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC093510.2-201ENST00000562820 896 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 MIR4644-201ENST00000579929 84 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC103710.4-201ENST00000609301 899 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 UBE2L2-201ENST00000254302 429 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 RNA5SP368-201ENST00000364298 116 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC008379.1-201ENST00000463655 464 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC004223.1-201ENST00000479840 271 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 RN7SL297P-201ENST00000483161 293 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AL513185.2-201ENST00000425543 193 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC234064.1-201ENST00000436312 247 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 GOLGA5P1-201ENST00000507317 980 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
UBR4Q5T4S7 OR6C7P-201ENST00000547875 934 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC011492.1-201ENST00000600023 315 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AC112487.2-201ENST00000637950 304 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 AP002907.1-201ENST00000606361 1430 ntBASIC0.89□□□□□ -2.27
UBR4Q5T4S7 OR9N1P-202ENST00000494289 481 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC008163.1-202ENST00000636004 2889 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms