Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 RPS29P31-201ENST00000446147 164 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 SNORD97-201ENST00000459187 142 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC38Q502W7 RNA5SP208-201ENST00000516156 78 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC38Q502W7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 MIR3160-1-201ENST00000577972 85 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC099778.2-201ENST00000610904 211 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AL133173.2-201ENST00000614270 90 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 FRG1KP-201ENST00000623592 341 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AF117829.1-206ENST00000621883 3802 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC38Q502W7 ZNF826P-207ENST00000622273 1910 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC38Q502W7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC38Q502W7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC38Q502W7 RNA5SP295-201ENST00000362655 121 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 RNU6-623P-201ENST00000363143 105 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 SNORA57.1-201ENST00000391227 145 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 RN7SKP53-201ENST00000411337 315 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL663109.1-201ENST00000411498 844 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL513331.1-201ENST00000411908 397 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 BX842559.1-201ENST00000419615 532 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 ELOCP4-201ENST00000420090 333 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL451054.2-201ENST00000420896 202 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 ISCA1P6-201ENST00000427740 390 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL117339.2-201ENST00000430475 180 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC104850.1-201ENST00000435940 476 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 Z74696.2-201ENST00000436514 498 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 ARPC3P1-201ENST00000437218 533 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC020550.1-201ENST00000447385 163 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL136380.1-201ENST00000447970 162 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 KLF3P2-201ENST00000465138 268 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 RNU6-1256P-201ENST00000516539 103 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 Vault.3-201ENST00000516676 95 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC004024.1-201ENST00000549244 247 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC103987.3-201ENST00000582071 292 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 BNIP3P33-201ENST00000598912 569 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC067959.1-201ENST00000604334 379 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC072046.2-201ENST00000618366 268 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 AC068137.4-201ENST00000638485 296 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC38Q502W7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC38Q502W7 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
CCDC38Q502W7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC38Q502W7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC38Q502W7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC38Q502W7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 SNORA11-201ENST00000408789 128 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC017079.2-201ENST00000416102 485 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC245054.1-201ENST00000420944 258 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC009237.8-201ENST00000445492 379 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AL359385.1-201ENST00000456509 365 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 RBM43P1-201ENST00000476891 1081 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 RN7SKP298-201ENST00000515950 94 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC022695.1-201ENST00000522089 237 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC38Q502W7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC012213.3-201ENST00000577199 777 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC009570.1-201ENST00000609599 745 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 AL732618.1-201ENST00000623251 301 ntBASIC3.88□□□□□ -1.79
CCDC38Q502W7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC38Q502W7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms