Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL353689.1-201ENST00000438895 199 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 RPL7P12-201ENST00000446719 750 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL589880.1-201ENST00000448271 287 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 Z82190.1-201ENST00000454534 490 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 BZW1P2-201ENST00000473537 826 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC068781.1-201ENST00000488231 618 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC104685.1-201ENST00000502445 371 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC093281.2-201ENST00000510153 597 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 SNORA48.10-201ENST00000516965 160 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 MIR4299-201ENST00000577899 72 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL390838.2-201ENST00000602394 274 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC012443.1-201ENST00000605605 231 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AP001521.1-201ENST00000609150 300 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AC116618.1-201ENST00000634617 774 ntBASIC1.7□□□□□ -2.14
CCDC58Q4VC31 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC58Q4VC31 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 MTND4LP20-201ENST00000402379 270 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 RNF19BPX-201ENST00000426224 625 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 Z80107.1-201ENST00000436830 412 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AL831737.1-201ENST00000441288 271 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC009237.8-201ENST00000445492 379 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 MRPL35P4-201ENST00000453682 566 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 RNU6-420P-201ENST00000458780 107 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AP001486.1-201ENST00000463339 476 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 SCARNA17.1-201ENST00000516211 143 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 SCARNA17.2-201ENST00000516334 143 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 HSBP1P1-201ENST00000555205 166 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 MIR4529-201ENST00000578110 78 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 MIR3200-201ENST00000580767 85 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC106052.1-201ENST00000608029 497 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 MIR6798-201ENST00000612887 67 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 Y_RNA.783-201ENST00000613546 102 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 SCARNA17.4-201ENST00000614296 143 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC008555.8-201ENST00000623602 2168 ntBASIC1.69□□□□□ -2.14
CCDC58Q4VC31 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC58Q4VC31 AC010329.5-201ENST00000623497 2174 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AL136360.1-201ENST00000503377 1900 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 MIR147B-201ENST00000390185 80 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 EIF1AXP1-201ENST00000419267 435 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AL445646.1-201ENST00000431784 216 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AC005297.2-201ENST00000450430 606 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AC025459.1-201ENST00000504072 156 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AC091965.2-201ENST00000512324 613 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AC103710.1-201ENST00000610003 901 ntBASIC1.68□□□□□ -2.14
CCDC58Q4VC31 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC58Q4VC31 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 ELF2P3-201ENST00000445099 1506 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 Y_RNA.333-201ENST00000365274 102 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 SNORA70.4-201ENST00000365509 134 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 RNU6-1328P-201ENST00000410938 106 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC010385.1-201ENST00000412374 256 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AL135786.1-201ENST00000415892 214 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC004865.1-201ENST00000442276 1003 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 RPL31P50-201ENST00000471002 296 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 RPL7P18-201ENST00000478965 734 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 HSPE1P6-201ENST00000479457 291 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 MTAPP1-201ENST00000489154 819 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 SNORA31.13-201ENST00000516624 135 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms