Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL157394.1-201ENST00000562983 1224 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC103987.3-201ENST00000582071 292 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC005771.1-201ENST00000585581 349 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AP001429.1-201ENST00000602568 530 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL359999.1-201ENST00000604513 294 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL022099.1-201ENST00000604551 712 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC103591.3-201ENST00000608684 209 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC008250.2-201ENST00000615261 205 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC092140.2-201ENST00000618027 521 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AC009159.1-201ENST00000618386 642 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL353748.2-201ENST00000622148 471 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 AL603839.4-201ENST00000624658 1005 ntBASIC3.61□□□□□ -1.83
USP41Q3LFD5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP41Q3LFD5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP41Q3LFD5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP41Q3LFD5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP41Q3LFD5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP41Q3LFD5 TEX21P-201ENST00000447107 1476 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC068647.1-201ENST00000489539 2265 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL353746.1-201ENST00000566293 6881 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC116096.1-201ENST00000566804 2314 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP41Q3LFD5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP41Q3LFD5 RNU6-600P-201ENST00000362524 99 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AP002088.1-201ENST00000382740 395 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MIR128-1-201ENST00000384921 82 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 FCF1P10-201ENST00000407590 479 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 RNU2-43P-201ENST00000410306 190 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 RNU6-516P-201ENST00000411381 104 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC006366.1-201ENST00000422002 759 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC233728.2-201ENST00000425348 757 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 Z75741.1-201ENST00000446793 314 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 TPT1P14-201ENST00000448018 505 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MTND1P27-201ENST00000451117 902 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 RPS24P6-201ENST00000452670 400 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MTND1P9-201ENST00000453775 944 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 CFTRP1-201ENST00000456646 183 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC055855.1-201ENST00000489563 579 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 RPL7P23-201ENST00000493874 747 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC096751.1-202ENST00000502691 1067 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MLLT10P2-201ENST00000506434 249 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 KLHL2P1-201ENST00000508691 521 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MTND3P5-201ENST00000512798 333 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC022616.6-201ENST00000520479 119 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC123904.2-201ENST00000548059 300 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL356432.3-201ENST00000568952 465 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC009977.1-201ENST00000586015 570 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC004223.2-201ENST00000590309 544 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL355472.4-201ENST00000610233 626 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL590282.1-201ENST00000610379 1136 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC138749.5-201ENST00000611461 208 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC116165.2-201ENST00000616705 206 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC108479.2-201ENST00000617314 601 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC092656.1-203ENST00000624134 423 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 AL159972.1-201ENST00000625150 448 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MIR7153-201ENST00000637758 57 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP41Q3LFD5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
USP41Q3LFD5 AC092104.1-201ENST00000497346 1441 ntBASIC3.6□□□□□ -1.83
USP41Q3LFD5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP41Q3LFD5 Y_RNA.194-201ENST00000363985 102 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 RNU6-637P-201ENST00000384050 107 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 MIR634-201ENST00000385208 97 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 RNU6-882P-201ENST00000391025 103 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 SNORD115.1-201ENST00000391109 76 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP41Q3LFD5 RNA5SP293-201ENST00000410527 113 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 SPA17P1-201ENST00000416656 452 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 RPS15AP6-201ENST00000420703 385 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 RPL21P66-201ENST00000426566 466 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 DLGAP5P1-201ENST00000430307 464 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 FTH1P1-201ENST00000437933 532 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.59□□□□□ -1.83
USP41Q3LFD5 TXNP1-201ENST00000441872 371 ntBASIC3.59□□□□□ -1.83
USP41Q3LFD5 AL022238.1-201ENST00000442557 355 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms