Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ARL2BPP6-201ENST00000512757 439 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 RNA5SP208-201ENST00000516156 78 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-201P-201ENST00000517100 61 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AP003467.2-201ENST00000520175 319 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC123904.2-201ENST00000548059 300 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 MIR3913-1-201ENST00000577744 102 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 MIR5195-201ENST00000583555 115 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC006504.3-201ENST00000586818 523 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC006254.3-201ENST00000603353 884 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AL353621.2-201ENST00000605340 133 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-87P-201ENST00000607561 108 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC104458.1-201ENST00000608243 463 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC092954.2-201ENST00000609103 430 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AC007823.1-201ENST00000569932 1566 ntBASIC4.1□□□□□ -1.75
TRIM71Q2Q1W2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 RNU6-629P-201ENST00000384061 103 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 Y_RNA.450-201ENST00000384198 113 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 BX890604.2-201ENST00000427883 474 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC073614.1-201ENST00000438690 650 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL662791.1-201ENST00000441992 928 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 SNRPEP8-201ENST00000442866 260 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 Z99127.3-201ENST00000448158 395 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 MTND5P20-201ENST00000448677 143 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC010655.1-201ENST00000449336 292 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 MTND1P9-201ENST00000453775 944 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC013267.1-201ENST00000458227 267 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 RPL23AP62-201ENST00000463396 453 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 RPL9P32-201ENST00000464118 620 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC008155.2-201ENST00000464337 397 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC026427.2-201ENST00000506228 536 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC114781.4-201ENST00000513707 639 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 MTCO2P4-201ENST00000517968 247 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 RANP9-201ENST00000519957 271 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 HMGN1P28-201ENST00000521340 364 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AP001646.1-201ENST00000527936 915 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL133271.1-201ENST00000538229 291 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL356432.3-201ENST00000568952 465 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 MIR3682-201ENST00000581338 84 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 UBE2L4-201ENST00000587688 464 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 CKS1BP3-201ENST00000600888 237 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL356055.1-201ENST00000602528 446 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL161729.4-201ENST00000604650 476 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL137849.1-201ENST00000604767 169 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC006338.1-201ENST00000618453 749 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 U7.8-201ENST00000619968 63 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL158801.5-201ENST00000623123 465 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AL159972.1-201ENST00000625150 448 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 AC004925.1-201ENST00000624256 2706 ntBASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM71Q2Q1W2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM71Q2Q1W2 MFSD8-236ENST00000641509 4050 ntBASIC4.09□□□□□ -1.76
TRIM71Q2Q1W2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM71Q2Q1W2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 Y_RNA.9-201ENST00000362354 101 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 RPS3AP36-201ENST00000398190 775 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 RNU6-516P-201ENST00000411381 104 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 JKAMPP1-201ENST00000413804 919 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 OR1AA1P-201ENST00000419597 916 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 AL353777.1-201ENST00000425552 326 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 HMGN2P21-201ENST00000447764 270 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 HMGB3P22-202ENST00000451823 572 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 CYCSP35-201ENST00000451978 304 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 HMGN2P7-201ENST00000456186 273 ntBASIC4.08□□□□□ -1.76
TRIM71Q2Q1W2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms