Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AC010615.3-201ENST00000597319 394 ntBASIC2.12□□□□□ -2.07
RFX7Q2KHR2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AL355810.1-201ENST00000614629 552 ntBASIC2.12□□□□□ -2.07
RFX7Q2KHR2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX7Q2KHR2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 RNU6-193P-201ENST00000410977 107 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 MTCO3P4-201ENST00000419236 787 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 AL445687.1-201ENST00000439946 251 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 SNORA31.18-201ENST00000517043 134 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 MIR3618-201ENST00000580330 88 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 WWP1P1-201ENST00000466609 2769 ntBASIC2.11□□□□□ -2.07
RFX7Q2KHR2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFX7Q2KHR2 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 RNU6-386P-201ENST00000362650 107 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 RNU6-185P-201ENST00000384421 107 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 HMGN2P19-201ENST00000425149 265 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC023512.1-201ENST00000444513 499 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AL034418.1-201ENST00000448675 860 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 BTF3P12-201ENST00000519620 469 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC087272.1-201ENST00000523624 533 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 EIF4EP5-201ENST00000528228 640 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 NDUFS5P6-201ENST00000529136 295 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 CYCSP26-201ENST00000534107 320 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 CBX3P4-201ENST00000538909 354 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC067805.1-201ENST00000559344 470 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 MIR8070-201ENST00000616510 88 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC012150.2-201ENST00000621300 544 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC009812.4-201ENST00000569134 1805 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 RPL23AP39-201ENST00000415533 405 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 TMEM167AP1-201ENST00000423409 219 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC090453.1-201ENST00000495560 436 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC096571.1-202ENST00000506634 735 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC024614.2-201ENST00000577584 372 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AL355812.1-201ENST00000603215 216 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AL449363.1-201ENST00000617815 186 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
RFX7Q2KHR2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX7Q2KHR2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 RNU6-443P-201ENST00000384780 107 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 RNU4-62P-201ENST00000410125 130 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 ARL5AP3-201ENST00000439327 386 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 AC005840.1-201ENST00000498412 377 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 MLLT10P2-201ENST00000506434 249 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 HMGB1P47-201ENST00000511281 589 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 MIR514B-201ENST00000516774 80 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 AC067904.2-201ENST00000517322 1283 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 AC126177.3-201ENST00000551839 688 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.09□□□□□ -2.08
RFX7Q2KHR2 TRAV28-201ENST00000557548 323 ntBASIC2.09□□□□□ -2.08
RFX7Q2KHR2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms