Protein–RNA interactions for Protein: Q1ED39

KNOP1, Lysine-rich nucleolar protein 1, humanhuman

Known RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1Q1ED39 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC074050.1-201ENST00000563247 211 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AL109653.1-201ENST00000603091 248 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC012119.1-201ENST00000603184 222 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC012669.1-201ENST00000603209 283 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 AC122133.1-201ENST00000613964 233 ntBASIC3.11□□□□□ -1.91
KNOP1Q1ED39 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.11□□□□□ -1.91
KNOP1Q1ED39 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 Y_RNA.333-201ENST00000365274 102 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 SNORA44-201ENST00000384584 132 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 MIR181B1-201ENST00000385240 110 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 UBA52P6-201ENST00000399822 382 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 RNU6-712P-201ENST00000410558 100 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 MTCO3P12-201ENST00000416718 547 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 YPEL5P1-201ENST00000419731 367 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 MTND4LP10-201ENST00000435146 291 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 MTCYBP39-201ENST00000437562 491 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 PAXBP1P1-201ENST00000449315 447 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC026427.2-201ENST00000506228 536 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC090615.1-201ENST00000577519 154 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC008088.1-201ENST00000580993 280 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC004853.1-201ENST00000604902 698 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AC093732.2-201ENST00000607950 274 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 AL110115.1-201ENST00000614396 364 ntBASIC3.1□□□□□ -1.91
KNOP1Q1ED39 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KNOP1Q1ED39 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AL161781.1-201ENST00000354277 403 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 RNU6-660P-201ENST00000364566 109 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 MIR320C1-201ENST00000408566 88 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 LSM1P1-201ENST00000438629 273 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AL513043.1-201ENST00000439124 535 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 BET1P1-201ENST00000482276 359 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC011825.1-201ENST00000484967 388 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AL163153.1-201ENST00000554223 283 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC109446.2-201ENST00000567872 497 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AL356585.4-201ENST00000623078 1229 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 AC092192.1-201ENST00000633154 1018 ntBASIC3.09□□□□□ -1.91
KNOP1Q1ED39 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 AC092447.10-201ENST00000620607 1652 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 AL672167.1-206ENST00000356293 943 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 Y_RNA.234-201ENST00000364409 97 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 RNU6-744P-201ENST00000365557 107 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 SNORA9-201ENST00000384215 133 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 RNU6-1316P-201ENST00000384242 108 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 MIR491-201ENST00000384877 84 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 RNU4-65P-201ENST00000410473 140 ntBASIC3.08□□□□□ -1.92
KNOP1Q1ED39 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.08□□□□□ -1.92
KNOP1Q1ED39 OR2B8P-201ENST00000432841 938 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms