Protein–RNA interactions for Protein: Q15818

NPTX1, Neuronal pentraxin-1, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1Q15818 TRIM60P18-201ENST00000441518 828 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 USP9YP12-201ENST00000450481 570 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 MTND2P24-201ENST00000453434 806 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.15□□□□□ -1.91
NPTX1Q15818 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.15□□□□□ -1.91
NPTX1Q15818 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPTX1Q15818 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AC022616.6-201ENST00000520479 119 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AC060788.1-201ENST00000521318 469 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AC006130.2-201ENST00000586202 326 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AF038458.1-201ENST00000588406 262 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AL359999.1-201ENST00000604513 294 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AP000254.1-201ENST00000609934 520 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AC073114.1-201ENST00000612027 490 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPTX1Q15818 AC090970.3-201ENST00000612566 866 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AL121772.2-201ENST00000614331 297 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AC104010.1-201ENST00000616889 150 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 AC025048.6-202ENST00000627667 438 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 CU459211.1-201ENST00000635667 749 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
NPTX1Q15818 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NPTX1Q15818 AL161912.2-201ENST00000565707 3007 ntBASIC3.15□□□□□ -1.91
NPTX1Q15818 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.15□□□□□ -1.91
NPTX1Q15818 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.15□□□□□ -1.91
NPTX1Q15818 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NPTX1Q15818 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.14□□□□□ -1.91
NPTX1Q15818 RNA5SP124-201ENST00000362739 110 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 RNA5SP197-201ENST00000363357 119 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 RNU1-39P-201ENST00000383897 165 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 MIR1302-8-201ENST00000408342 128 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 CYCSP19-201ENST00000411715 316 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AL353777.1-201ENST00000425552 326 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC093151.1-201ENST00000427711 313 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 CYCSP4-201ENST00000429682 331 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 ATP5JP1-201ENST00000431631 322 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC129850.1-201ENST00000436203 508 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 MTND2P4-201ENST00000445034 1004 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 ELOCP30-201ENST00000447108 299 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC008264.1-201ENST00000447612 367 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.14□□□□□ -1.91
NPTX1Q15818 SNRPGP9-201ENST00000456025 225 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC108059.3-201ENST00000456388 214 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 RPL21P8-201ENST00000465083 535 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 RN7SL542P-201ENST00000467147 294 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 RPL31P60-201ENST00000478450 367 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.14□□□□□ -1.91
NPTX1Q15818 OR5BM1P-201ENST00000512021 366 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 RNU6-201P-201ENST00000517100 61 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AP002748.2-201ENST00000528671 348 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.14□□□□□ -1.91
NPTX1Q15818 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC123904.2-201ENST00000548059 300 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.14□□□□□ -1.91
NPTX1Q15818 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC245389.1-201ENST00000605141 529 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 OR4G2P-202ENST00000641004 1759 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 ELL2P3-201ENST00000457883 1602 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 AL356274.2-201ENST00000624379 3752 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPTX1Q15818 AC008568.2-201ENST00000623862 2313 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NPTX1Q15818 SDAD1P2-201ENST00000441308 2028 ntBASIC3.14□□□□□ -1.91
NPTX1Q15818 ZNF807-201ENST00000328088 1707 ntBASIC3.13□□□□□ -1.91
NPTX1Q15818 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPTX1Q15818 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPTX1Q15818 MIR514A1-201ENST00000385133 98 ntBASIC3.13□□□□□ -1.91
NPTX1Q15818 RNU6-278P-201ENST00000390945 109 ntBASIC3.13□□□□□ -1.91
NPTX1Q15818 AC110754.1-201ENST00000399740 601 ntBASIC3.13□□□□□ -1.91
NPTX1Q15818 TXNP7-201ENST00000406296 293 ntBASIC3.13□□□□□ -1.91
NPTX1Q15818 RN7SKP111-201ENST00000410349 271 ntBASIC3.13□□□□□ -1.91
NPTX1Q15818 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.13□□□□□ -1.91
NPTX1Q15818 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.13□□□□□ -1.91
NPTX1Q15818 USP9YP13-201ENST00000417797 480 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms