Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC090774.1-201ENST00000435925 246 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 MTATP6P7-201ENST00000453315 681 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 RPL21P126-201ENST00000470049 478 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 RN7SL570P-201ENST00000484405 292 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 AC008897.1-201ENST00000494006 347 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.42□□□□□ -1.54
FOXC1Q12948 FTH1P24-201ENST00000503502 462 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.42□□□□□ -1.54
FOXC1Q12948 RNU6-191P-201ENST00000516295 94 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 AC008694.2-201ENST00000517591 306 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXC1Q12948 AC005476.1-201ENST00000554427 397 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXC1Q12948 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.42□□□□□ -1.54
FOXC1Q12948 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.42□□□□□ -1.54
FOXC1Q12948 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXC1Q12948 AL450472.3-201ENST00000615578 367 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 AC090607.5-201ENST00000615692 224 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 SCARNA4-201ENST00000629045 128 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXC1Q12948 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXC1Q12948 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXC1Q12948 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.42□□□□□ -1.54
FOXC1Q12948 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXC1Q12948 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FOXC1Q12948 MAPK10-323ENST00000641493 3207 ntBASIC5.42□□□□□ -1.54
FOXC1Q12948 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.42□□□□□ -1.54
FOXC1Q12948 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FOXC1Q12948 OLMALINC-203ENST00000641087 3779 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXC1Q12948 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 FTLP6-201ENST00000355274 422 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 SNORA62-201ENST00000365493 153 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 RNU6-339P-201ENST00000384310 107 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 MIR192-201ENST00000384915 110 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.41□□□□□ -1.54
FOXC1Q12948 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.41□□□□□ -1.54
FOXC1Q12948 AC063976.4-201ENST00000421971 163 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXC1Q12948 ACA64.4-201ENST00000459070 127 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 AK3P2-201ENST00000507976 429 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 APOOP4-201ENST00000513530 597 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 RNA5SP76-201ENST00000516277 87 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 RNU6-1315P-201ENST00000517187 99 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXC1Q12948 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.41□□□□□ -1.54
FOXC1Q12948 TRAV28-201ENST00000557548 323 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 AP005403.1-201ENST00000579720 229 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 AL645944.1-201ENST00000603857 493 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 AC011603.4-201ENST00000611325 277 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
FOXC1Q12948 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXC1Q12948 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXC1Q12948 AL034546.1-201ENST00000623740 3693 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
FOXC1Q12948 AC109446.4-201ENST00000623235 2755 ntBASIC5.41□□□□□ -1.54
FOXC1Q12948 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
FOXC1Q12948 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXC1Q12948 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXC1Q12948 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXC1Q12948 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FOXC1Q12948 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
FOXC1Q12948 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 AL079305.1-201ENST00000623159 3008 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 AC105749.1-201ENST00000631338 2008 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 ZNF204P-201ENST00000416749 2397 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXC1Q12948 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXC1Q12948 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXC1Q12948 SNORA51.8-201ENST00000384234 132 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 CTSL3P-202ENST00000412179 788 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 AL451062.2-201ENST00000427515 271 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 AC009296.1-201ENST00000443146 155 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 RPL23AP40-201ENST00000487630 390 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 AC006499.6-201ENST00000511169 607 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.4□□□□□ -1.54
FOXC1Q12948 RNU6-1114P-201ENST00000516022 107 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXC1Q12948 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXC1Q12948 AC008745.1-201ENST00000604064 271 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 AL161629.2-201ENST00000615347 275 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 AC090617.7-201ENST00000623952 126 ntBASIC5.4□□□□□ -1.54
FOXC1Q12948 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
FOXC1Q12948 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXC1Q12948 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXC1Q12948 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms