Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC096638.1-201ENST00000444678 216 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 OR6K5P-201ENST00000447050 945 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 MTCO1P48-201ENST00000448024 1096 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.93□□□□□ -2.1
FOXF1Q12946 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC023424.2-201ENST00000493479 777 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC093767.1-201ENST00000504523 156 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXF1Q12946 RNU5A-7P-201ENST00000515979 116 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
FOXF1Q12946 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
FOXF1Q12946 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
FOXF1Q12946 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXF1Q12946 MED28P6-201ENST00000558776 231 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 ZNF971P-201ENST00000562068 1249 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXF1Q12946 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXF1Q12946 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXF1Q12946 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXF1Q12946 VN1R87P-201ENST00000596706 487 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC106900.2-201ENST00000604994 317 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AL161734.1-201ENST00000609720 557 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AL353748.2-201ENST00000622148 471 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC109454.4-201ENST00000623411 649 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 MFSD8-245ENST00000641743 948 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 AC087359.1-201ENST00000508335 1740 ntBASIC1.93□□□□□ -2.1
FOXF1Q12946 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
FOXF1Q12946 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
FOXF1Q12946 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
FOXF1Q12946 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXF1Q12946 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
FOXF1Q12946 RNU5B-1-201ENST00000363286 116 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 SNORA67.1-201ENST00000364749 141 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
FOXF1Q12946 SUGT1P1-201ENST00000379514 476 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
FOXF1Q12946 SNORD51-201ENST00000384320 80 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 MIR506-201ENST00000384998 124 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 RN7SKP32-201ENST00000410167 303 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AC092634.6-201ENST00000418558 192 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.92□□□□□ -2.1
FOXF1Q12946 AL137014.1-201ENST00000420490 1226 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXF1Q12946 AC079780.1-201ENST00000428259 207 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AL139415.2-201ENST00000431968 163 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 MTND4LP10-201ENST00000435146 291 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.92□□□□□ -2.1
FOXF1Q12946 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.92□□□□□ -2.1
FOXF1Q12946 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AC234775.1-201ENST00000454247 670 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AL031183.1-201ENST00000457667 207 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXF1Q12946 RPL9P6-201ENST00000492764 598 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AC084024.2-201ENST00000503480 791 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AC109471.1-201ENST00000511631 612 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 RNU6-1095P-201ENST00000516148 108 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXF1Q12946 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXF1Q12946 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXF1Q12946 AC103810.1-201ENST00000579873 453 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 MIR5694-201ENST00000581190 76 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AP003973.1-201ENST00000604639 691 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 AP005137.2-201ENST00000609238 400 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 MIR6895-201ENST00000613497 78 ntBASIC1.92□□□□□ -2.1
FOXF1Q12946 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.92□□□□□ -2.1
FOXF1Q12946 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.92□□□□□ -2.1
FOXF1Q12946 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
FOXF1Q12946 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
FOXF1Q12946 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
FOXF1Q12946 MTCO1P23-201ENST00000415223 1526 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXF1Q12946 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
FOXF1Q12946 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
FOXF1Q12946 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
FOXF1Q12946 SNORA64-201ENST00000384674 134 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 MIR627-201ENST00000384979 97 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 MIR493-201ENST00000385254 89 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 RNA5SP252-201ENST00000391131 119 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AL355615.1-201ENST00000406187 641 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.91□□□□□ -2.1
FOXF1Q12946 MTCO2P1-201ENST00000424648 477 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 RAC1P8-201ENST00000427086 527 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 MTCYBP32-201ENST00000427945 1084 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 FO393414.1-201ENST00000428697 1184 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 ARF4P4-201ENST00000439608 520 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 FAM103A2P-201ENST00000444122 354 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.91□□□□□ -2.1
FOXF1Q12946 AL359385.1-201ENST00000456509 365 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 TRBV12-1-201ENST00000479785 344 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 GZMAP1-201ENST00000503054 631 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXF1Q12946 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXF1Q12946 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXF1Q12946 OR4P1P-201ENST00000530808 1136 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.91□□□□□ -2.1
FOXF1Q12946 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.91□□□□□ -2.1
FOXF1Q12946 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXF1Q12946 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXF1Q12946 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms