Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 OR6C66P-201ENST00000414917 930 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC009161.1-201ENST00000417306 376 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 TPT1P12-201ENST00000448968 492 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AL118520.1-201ENST00000450770 291 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.78□□□□□ -1.64
SSRP1Q08945 MTND3P16-201ENST00000452205 344 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 RPL7AP28-201ENST00000464513 571 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.78□□□□□ -1.64
SSRP1Q08945 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC110792.1-201ENST00000491826 472 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 RPS27AP13-201ENST00000498403 237 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC083829.1-201ENST00000503756 657 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC025554.1-201ENST00000505641 188 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.78□□□□□ -1.64
SSRP1Q08945 DEFB109D-201ENST00000529497 240 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 BNIP3P6-201ENST00000549284 499 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.78□□□□□ -1.64
SSRP1Q08945 MIR3939-201ENST00000582614 106 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 SDR42E1P2-201ENST00000614861 481 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSRP1Q08945 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC009812.4-201ENST00000569134 1805 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSRP1Q08945 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSRP1Q08945 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
SSRP1Q08945 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSRP1Q08945 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSRP1Q08945 MARK2P15-201ENST00000432204 2186 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSRP1Q08945 RNU6-946P-201ENST00000383878 107 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 Y_RNA.576-201ENST00000384781 102 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 MIR514A2-201ENST00000385131 88 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 MIR514A3-201ENST00000385132 88 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 MT-TD-201ENST00000387419 68 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC068533.1-201ENST00000418542 415 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.77□□□□□ -1.65
SSRP1Q08945 MTATP6P4-201ENST00000427725 675 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC079780.1-201ENST00000428259 207 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.77□□□□□ -1.65
SSRP1Q08945 AC024082.2-201ENST00000434771 238 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC093019.1-201ENST00000443135 252 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC073587.1-201ENST00000447093 876 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 RN7SL385P-201ENST00000468873 276 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 RPL23AP11-201ENST00000475260 469 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 VN1R105P-201ENST00000486595 910 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 VN1R104P-201ENST00000505115 1009 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 MTND3P22-201ENST00000510932 243 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 RNU7-143P-201ENST00000516781 65 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.77□□□□□ -1.65
SSRP1Q08945 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.77□□□□□ -1.65
SSRP1Q08945 AC012182.1-201ENST00000570133 895 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.77□□□□□ -1.65
SSRP1Q08945 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSRP1Q08945 AL117336.2-201ENST00000602435 335 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 C8orf59P2-201ENST00000603441 271 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SSRP1Q08945 AL023881.1-201ENST00000621088 301 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSRP1Q08945 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSRP1Q08945 AC092326.2-201ENST00000624772 1561 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSRP1Q08945 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SSRP1Q08945 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSRP1Q08945 MTND4P29-201ENST00000503122 1372 ntBASIC4.77□□□□□ -1.65
SSRP1Q08945 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.77□□□□□ -1.65
SSRP1Q08945 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSRP1Q08945 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.76□□□□□ -1.65
SSRP1Q08945 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSRP1Q08945 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSRP1Q08945 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSRP1Q08945 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SSRP1Q08945 RNU6-845P-201ENST00000362578 103 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 RNU4-20P-201ENST00000365601 151 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 EEF1A1P40-201ENST00000412883 573 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.76□□□□□ -1.65
SSRP1Q08945 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.76□□□□□ -1.65
SSRP1Q08945 MTCO1P39-201ENST00000426148 480 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 AL358472.1-201ENST00000431295 329 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 ERLEC1P1-201ENST00000433806 578 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 RPL26P6-201ENST00000440913 438 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.76□□□□□ -1.65
SSRP1Q08945 SNRPFP3-201ENST00000457792 225 ntBASIC4.76□□□□□ -1.65
SSRP1Q08945 AC010618.1-201ENST00000469924 477 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms