Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RNA5SP124-201ENST00000362739 110 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
PRAMEP78395 SNORD116-1-201ENST00000384335 95 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 MIR1290-201ENST00000408735 78 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 RN7SKP140-201ENST00000411196 284 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 RN7SKP142-201ENST00000411236 328 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.47□□□□□ -1.85
PRAMEP78395 RPS15AP12-201ENST00000419498 388 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.47□□□□□ -1.85
PRAMEP78395 CYCSP4-201ENST00000429682 331 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.47□□□□□ -1.85
PRAMEP78395 NDUFB4P6-201ENST00000436819 366 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC005094.1-201ENST00000440420 368 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.47□□□□□ -1.85
PRAMEP78395 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.47□□□□□ -1.85
PRAMEP78395 SSXP1-201ENST00000453640 473 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.47□□□□□ -1.85
PRAMEP78395 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.47□□□□□ -1.85
PRAMEP78395 RPS20P20-201ENST00000460498 340 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC110768.1-201ENST00000509222 400 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 OR5BM1P-201ENST00000512021 366 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 TTC39CP1-201ENST00000512513 755 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.47□□□□□ -1.85
PRAMEP78395 AC107934.2-201ENST00000518653 310 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AP003122.4-201ENST00000530980 758 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.47□□□□□ -1.85
PRAMEP78395 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
PRAMEP78395 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.47□□□□□ -1.85
PRAMEP78395 HMGN1P30-201ENST00000589286 268 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 BNIP3P8-201ENST00000597863 560 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC103710.1-201ENST00000610003 901 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.47□□□□□ -1.85
PRAMEP78395 AL158063.1-201ENST00000615349 536 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC110801.1-201ENST00000623590 212 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.47□□□□□ -1.85
PRAMEP78395 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.47□□□□□ -1.85
PRAMEP78395 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRAMEP78395 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PRAMEP78395 AC032011.1-201ENST00000611703 1549 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PRAMEP78395 RNU6-1197P-201ENST00000391183 107 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 FAT1P1-201ENST00000406588 507 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 RAB9AP3-201ENST00000412737 573 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 ELOCP17-201ENST00000414751 326 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 SPA17P1-201ENST00000416656 452 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 BX890604.2-201ENST00000427883 474 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.46□□□□□ -1.86
PRAMEP78395 RAB9AP1-201ENST00000449393 573 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.46□□□□□ -1.86
PRAMEP78395 Y_RNA.695-201ENST00000516715 107 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 CASP1P1-201ENST00000526345 212 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC103843.2-201ENST00000530523 682 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC007115.1-201ENST00000546853 234 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC004024.1-201ENST00000549244 247 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AL163153.1-201ENST00000554223 283 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 RPL21P5-201ENST00000554662 472 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.46□□□□□ -1.86
PRAMEP78395 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.46□□□□□ -1.86
PRAMEP78395 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.46□□□□□ -1.86
PRAMEP78395 RPL23AP84-201ENST00000571193 464 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC009977.1-201ENST00000586015 570 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.46□□□□□ -1.86
PRAMEP78395 AC013553.2-201ENST00000604244 589 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AP000860.1-201ENST00000605250 559 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 RNU6-87P-201ENST00000607561 108 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.46□□□□□ -1.86
PRAMEP78395 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.46□□□□□ -1.86
PRAMEP78395 AC092140.2-201ENST00000618027 521 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 AC006338.1-201ENST00000618453 749 ntBASIC3.46□□□□□ -1.86
PRAMEP78395 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.46□□□□□ -1.86
PRAMEP78395 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
PRAMEP78395 AC092104.1-201ENST00000497346 1441 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRAMEP78395 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRAMEP78395 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRAMEP78395 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRAMEP78395 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRAMEP78395 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PRAMEP78395 MIR325-201ENST00000385260 98 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 RNU6-55P-201ENST00000411092 107 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 RNU6-954P-201ENST00000411355 107 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 TMEM167AP1-201ENST00000423409 219 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.45□□□□□ -1.86
PRAMEP78395 AL356867.1-201ENST00000429623 299 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 MTATP6P30-201ENST00000443540 664 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRAMEP78395 TAF9P1-201ENST00000445421 515 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 Z83846.1-201ENST00000446798 265 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 AL133547.1-201ENST00000448546 220 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 PDSS1P2-201ENST00000449397 678 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 TAF9P2-201ENST00000454958 515 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 MTND1P3-201ENST00000484956 952 ntBASIC3.45□□□□□ -1.86
PRAMEP78395 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.45□□□□□ -1.86
PRAMEP78395 AC010265.1-201ENST00000513509 211 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms