Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CCT4P2-201ENST00000233836 1548 ntBASIC2.35□□□□□ -2.03
TPM4P67936 MTND4P35-201ENST00000604257 1375 ntBASIC2.35□□□□□ -2.03
TPM4P67936 AC016769.3-201ENST00000396562 315 ntBASIC2.34□□□□□ -2.03
TPM4P67936 U3.40-201ENST00000408706 208 ntBASIC2.34□□□□□ -2.03
TPM4P67936 USP12PX-201ENST00000432383 1057 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AL591719.1-201ENST00000444669 744 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AL118520.1-201ENST00000450770 291 ntBASIC2.34□□□□□ -2.03
TPM4P67936 ANKRD26P4-201ENST00000455755 950 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM4P67936 RNU4-29P-201ENST00000515943 174 ntBASIC2.34□□□□□ -2.03
TPM4P67936 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.34□□□□□ -2.03
TPM4P67936 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.34□□□□□ -2.03
TPM4P67936 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.34□□□□□ -2.03
TPM4P67936 MTCYBP27-201ENST00000555160 670 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AC027176.1-201ENST00000560204 514 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AC234778.2-201ENST00000566241 354 ntBASIC2.34□□□□□ -2.03
TPM4P67936 RPS3AP23-202ENST00000574601 686 ntBASIC2.34□□□□□ -2.03
TPM4P67936 LARP7P3-201ENST00000579888 337 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AL031176.1-201ENST00000604554 466 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.34□□□□□ -2.03
TPM4P67936 AC009090.3-201ENST00000616553 565 ntBASIC2.34□□□□□ -2.03
TPM4P67936 DUXAP9-208ENST00000622815 614 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AC025034.2-201ENST00000623264 286 ntBASIC2.34□□□□□ -2.03
TPM4P67936 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
TPM4P67936 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.34□□□□□ -2.03
TPM4P67936 AL049641.1-201ENST00000441055 1948 ntBASIC2.34□□□□□ -2.04
TPM4P67936 AL365361.1-201ENST00000566942 3481 ntBASIC2.34□□□□□ -2.04
TPM4P67936 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TPM4P67936 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
TPM4P67936 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
TPM4P67936 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
TPM4P67936 NDUFB4P4-201ENST00000404822 243 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AL139098.1-201ENST00000407291 389 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.33□□□□□ -2.04
TPM4P67936 RPS7P9-201ENST00000414704 586 ntBASIC2.33□□□□□ -2.04
TPM4P67936 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.33□□□□□ -2.04
TPM4P67936 AL590383.1-201ENST00000428602 75 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AL356867.1-201ENST00000429623 299 ntBASIC2.33□□□□□ -2.04
TPM4P67936 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM4P67936 BMI1P1-201ENST00000445879 941 ntBASIC2.33□□□□□ -2.04
TPM4P67936 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.33□□□□□ -2.04
TPM4P67936 AC097493.1-201ENST00000463958 372 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AC084024.2-201ENST00000503480 791 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.33□□□□□ -2.04
TPM4P67936 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
TPM4P67936 SCARNA17.1-201ENST00000516211 143 ntBASIC2.33□□□□□ -2.04
TPM4P67936 SCARNA17.2-201ENST00000516334 143 ntBASIC2.33□□□□□ -2.04
TPM4P67936 SCARNA11.3-201ENST00000517276 130 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AC118942.1-201ENST00000529674 1035 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM4P67936 SCARNA17.4-201ENST00000614296 143 ntBASIC2.33□□□□□ -2.04
TPM4P67936 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM4P67936 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TPM4P67936 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TPM4P67936 DDX10P1-201ENST00000448545 1933 ntBASIC2.32□□□□□ -2.04
TPM4P67936 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.32□□□□□ -2.04
TPM4P67936 AL451062.2-201ENST00000427515 271 ntBASIC2.32□□□□□ -2.04
TPM4P67936 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.32□□□□□ -2.04
TPM4P67936 ARF4P4-201ENST00000439608 520 ntBASIC2.32□□□□□ -2.04
TPM4P67936 CYCSP32-201ENST00000440548 321 ntBASIC2.32□□□□□ -2.04
TPM4P67936 IPO7P1-201ENST00000442031 636 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AC007000.2-201ENST00000442564 487 ntBASIC2.32□□□□□ -2.04
TPM4P67936 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TPM4P67936 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TPM4P67936 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TPM4P67936 AC109471.1-201ENST00000511631 612 ntBASIC2.32□□□□□ -2.04
TPM4P67936 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TPM4P67936 AP001646.1-201ENST00000527936 915 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.32□□□□□ -2.04
TPM4P67936 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.32□□□□□ -2.04
TPM4P67936 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.32□□□□□ -2.04
TPM4P67936 AL671309.1-201ENST00000603750 544 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AC007938.3-201ENST00000604965 623 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AL449363.1-201ENST00000617815 186 ntBASIC2.32□□□□□ -2.04
TPM4P67936 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.32□□□□□ -2.04
TPM4P67936 AL359851.1-201ENST00000569460 4997 ntBASIC2.31□□□□□ -2.04
TPM4P67936 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TPM4P67936 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
TPM4P67936 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TPM4P67936 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TPM4P67936 ANKRD36P1-201ENST00000344424 659 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM4P67936 FCF1P2-201ENST00000415284 583 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.31□□□□□ -2.04
TPM4P67936 AC007560.1-201ENST00000426912 237 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM4P67936 AC108938.1-201ENST00000451204 136 ntBASIC2.31□□□□□ -2.04
TPM4P67936 KLRA1P-201ENST00000503499 986 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.31□□□□□ -2.04
TPM4P67936 RNU6-551P-201ENST00000516661 103 ntBASIC2.31□□□□□ -2.04
TPM4P67936 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TPM4P67936 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM4P67936 AC135628.1-201ENST00000568867 534 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM4P67936 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.31□□□□□ -2.04
TPM4P67936 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM4P67936 RMST_10.1-201ENST00000616309 154 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AC006213.5-201ENST00000619673 288 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms