Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CFTRP1-201ENST00000456646 183 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 RPS4XP2-201ENST00000458402 793 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 CDC42P4-201ENST00000510507 563 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC022483.1-201ENST00000514020 567 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC107934.2-201ENST00000518653 310 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC025881.1-201ENST00000518851 512 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCN3P51790 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.64□□□□□ -1.83
CLCN3P51790 HIGD1AP1-201ENST00000550979 275 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCN3P51790 AC015917.1-201ENST00000579654 510 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AL160281.1-201ENST00000605307 311 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC073657.2-201ENST00000605661 303 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AL356321.1-201ENST00000621360 228 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AC009268.2-201ENST00000621925 457 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 AL603839.4-201ENST00000624658 1005 ntBASIC3.64□□□□□ -1.83
CLCN3P51790 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CLCN3P51790 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLCN3P51790 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN3P51790 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN3P51790 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN3P51790 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN3P51790 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.63□□□□□ -1.83
CLCN3P51790 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLCN3P51790 RNU5F-7P-201ENST00000363696 115 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 RNU6-1078P-201ENST00000364522 103 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 RNU6-517P-201ENST00000384362 110 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 Y_RNA.516-201ENST00000384541 124 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 Y_RNA.548-201ENST00000384656 105 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLCN3P51790 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCN3P51790 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 AL158071.1-201ENST00000430315 461 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCN3P51790 MTND1P4-201ENST00000435196 415 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 DNAJC19P4-201ENST00000440115 345 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 AL671855.1-201ENST00000446875 1203 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AC093899.1-201ENST00000457984 376 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCN3P51790 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 RPL23AP41-201ENST00000484754 458 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AC112204.1-201ENST00000502591 103 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 AC107401.1-201ENST00000503426 685 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCN3P51790 AC021146.1-201ENST00000511202 716 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AC116347.2-201ENST00000514912 523 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 FABP5P5-201ENST00000515537 406 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 RNU6-201P-201ENST00000517100 61 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCN3P51790 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN3P51790 MIR5004-201ENST00000579078 107 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 UBE2L4-201ENST00000587688 464 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AC015871.2-201ENST00000603605 948 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AL034351.1-201ENST00000605288 668 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AL713922.2-201ENST00000619384 716 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 AL158801.5-201ENST00000623123 465 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN3P51790 MTCO1P9-201ENST00000505577 1534 ntBASIC3.63□□□□□ -1.83
CLCN3P51790 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCN3P51790 TEX21P-201ENST00000447107 1476 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 AL353746.1-201ENST00000566293 6881 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCN3P51790 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 MIR135A2-201ENST00000384854 100 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 RNU6-248P-201ENST00000410720 107 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 ELOCP17-201ENST00000414751 326 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 AL356968.1-201ENST00000416622 474 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCN3P51790 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCN3P51790 AL138799.3-201ENST00000438968 350 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCN3P51790 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCN3P51790 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCN3P51790 MTCO1P42-201ENST00000457379 726 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCN3P51790 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCN3P51790 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 MTND4LP18-201ENST00000526864 291 ntBASIC3.62□□□□□ -1.83
CLCN3P51790 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms