Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.34□□□□□ -2.2
CENPFP49454 AL590095.2-201ENST00000604136 117 ntBASIC1.34□□□□□ -2.2
CENPFP49454 AL450326.2-201ENST00000421913 1962 ntBASIC1.33□□□□□ -2.2
CENPFP49454 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CENPFP49454 SUMO2P12-201ENST00000405924 140 ntBASIC1.33□□□□□ -2.2
CENPFP49454 AL357078.2-201ENST00000416486 427 ntBASIC1.33□□□□□ -2.2
CENPFP49454 AL590233.1-201ENST00000430017 456 ntBASIC1.33□□□□□ -2.2
CENPFP49454 AC006270.2-201ENST00000578523 652 ntBASIC1.33□□□□□ -2.2
CENPFP49454 AC010928.2-201ENST00000588017 287 ntBASIC1.33□□□□□ -2.2
CENPFP49454 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.33□□□□□ -2.2
CENPFP49454 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.33□□□□□ -2.2
CENPFP49454 AL162388.1-201ENST00000450912 352 ntBASIC1.33□□□□□ -2.2
CENPFP49454 HAUS1P1-201ENST00000505275 832 ntBASIC1.33□□□□□ -2.2
CENPFP49454 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CENPFP49454 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CENPFP49454 AC087468.1-201ENST00000604365 630 ntBASIC1.33□□□□□ -2.2
CENPFP49454 HMGN2P20-201ENST00000437531 273 ntBASIC1.32□□□□□ -2.2
CENPFP49454 RPS27AP10-201ENST00000496103 208 ntBASIC1.32□□□□□ -2.2
CENPFP49454 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CENPFP49454 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CENPFP49454 AC244636.1-201ENST00000421152 228 ntBASIC1.32□□□□□ -2.2
CENPFP49454 RNU4-60P-201ENST00000517239 135 ntBASIC1.32□□□□□ -2.2
CENPFP49454 VN1R107P-201ENST00000601784 209 ntBASIC1.32□□□□□ -2.2
CENPFP49454 AC073413.2-201ENST00000604332 360 ntBASIC1.32□□□□□ -2.2
CENPFP49454 MIR2909-201ENST00000617113 69 ntBASIC1.32□□□□□ -2.2
CENPFP49454 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.32□□□□□ -2.2
CENPFP49454 AC116618.1-201ENST00000634617 774 ntBASIC1.32□□□□□ -2.2
CENPFP49454 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.32□□□□□ -2.2
CENPFP49454 UBE2V1P13-201ENST00000436983 439 ntBASIC1.32□□□□□ -2.2
CENPFP49454 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.32□□□□□ -2.2
CENPFP49454 AC022447.3-201ENST00000506865 495 ntBASIC1.32□□□□□ -2.2
CENPFP49454 NDUFB4P9-201ENST00000511646 388 ntBASIC1.32□□□□□ -2.2
CENPFP49454 RNU6-35P-201ENST00000384530 107 ntBASIC1.31□□□□□ -2.2
CENPFP49454 AC008850.1-201ENST00000427546 362 ntBASIC1.31□□□□□ -2.2
CENPFP49454 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.31□□□□□ -2.2
CENPFP49454 AL353718.1-201ENST00000451028 517 ntBASIC1.31□□□□□ -2.2
CENPFP49454 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.31□□□□□ -2.2
CENPFP49454 LRRC34P2-201ENST00000514850 553 ntBASIC1.31□□□□□ -2.2
CENPFP49454 MTND5P9-201ENST00000503854 1755 ntBASIC1.31□□□□□ -2.2
CENPFP49454 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
CENPFP49454 AC090740.1-201ENST00000623193 2262 ntBASIC1.31□□□□□ -2.2
CENPFP49454 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CENPFP49454 MTCYBP19-201ENST00000517463 1124 ntBASIC1.31□□□□□ -2.2
CENPFP49454 AP004607.1-201ENST00000524456 203 ntBASIC1.31□□□□□ -2.2
CENPFP49454 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.31□□□□□ -2.2
CENPFP49454 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.31□□□□□ -2.2
CENPFP49454 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CENPFP49454 AC025263.3-201ENST00000622965 1396 ntBASIC1.31□□□□□ -2.2
CENPFP49454 MFSD8-213ENST00000641134 1327 ntBASIC1.3□□□□□ -2.2
CENPFP49454 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.3□□□□□ -2.2
CENPFP49454 MIR338-201ENST00000636369 67 ntBASIC1.3□□□□□ -2.2
CENPFP49454 RNU6-249P-201ENST00000363016 102 ntBASIC1.3□□□□□ -2.2
CENPFP49454 AL030996.1-201ENST00000411430 235 ntBASIC1.3□□□□□ -2.2
CENPFP49454 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.3□□□□□ -2.2
CENPFP49454 AC004022.1-201ENST00000447766 1066 ntBASIC1.3□□□□□ -2.2
CENPFP49454 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.3□□□□□ -2.2
CENPFP49454 AC009965.2-201ENST00000425328 970 ntBASIC1.3□□□□□ -2.2
CENPFP49454 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.3□□□□□ -2.2
CENPFP49454 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CENPFP49454 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.29□□□□□ -2.2
CENPFP49454 AL445687.1-201ENST00000439946 251 ntBASIC1.29□□□□□ -2.2
CENPFP49454 OR9N1P-202ENST00000494289 481 ntBASIC1.29□□□□□ -2.2
CENPFP49454 AC110792.2-201ENST00000510278 224 ntBASIC1.29□□□□□ -2.2
CENPFP49454 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.29□□□□□ -2.2
CENPFP49454 AC123912.5-201ENST00000605470 343 ntBASIC1.29□□□□□ -2.2
CENPFP49454 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CENPFP49454 CBX3P6-201ENST00000430257 527 ntBASIC1.29□□□□□ -2.2
CENPFP49454 AC107015.1-201ENST00000466902 747 ntBASIC1.29□□□□□ -2.2
CENPFP49454 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.29□□□□□ -2.2
CENPFP49454 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.29□□□□□ -2.2
CENPFP49454 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CENPFP49454 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.29□□□□□ -2.2
CENPFP49454 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CENPFP49454 Y_RNA.167-201ENST00000363735 109 ntBASIC1.28□□□□□ -2.2
CENPFP49454 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.28□□□□□ -2.2
CENPFP49454 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CENPFP49454 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CENPFP49454 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CENPFP49454 AC016769.3-201ENST00000396562 315 ntBASIC1.28□□□□□ -2.2
CENPFP49454 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.28□□□□□ -2.2
CENPFP49454 AL139109.1-201ENST00000455491 297 ntBASIC1.28□□□□□ -2.2
CENPFP49454 VN1R79P-201ENST00000593540 513 ntBASIC1.28□□□□□ -2.2
CENPFP49454 U73023.1-201ENST00000603134 700 ntBASIC1.28□□□□□ -2.2
CENPFP49454 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.28□□□□□ -2.2
CENPFP49454 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CENPFP49454 AL596276.1-201ENST00000434465 418 ntBASIC1.28□□□□□ -2.21
CENPFP49454 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.28□□□□□ -2.21
CENPFP49454 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.28□□□□□ -2.21
CENPFP49454 VTRNA1-1-201ENST00000363120 99 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AC009127.3-201ENST00000570531 403 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AL354685.2-201ENST00000448218 1447 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.27□□□□□ -2.21
CENPFP49454 OR51B8P-201ENST00000449892 769 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AC093801.2-201ENST00000503966 1050 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AC113155.1-201ENST00000511141 769 ntBASIC1.27□□□□□ -2.21
CENPFP49454 MTND5P21-201ENST00000531961 522 ntBASIC1.27□□□□□ -2.21
CENPFP49454 AC021755.4-201ENST00000616620 456 ntBASIC1.27□□□□□ -2.21
CENPFP49454 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CENPFP49454 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms