Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC093106.2-201ENST00000428212 385 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.13□□□□□ -1.59
CHRNA4P43681 RPL23AP81-201ENST00000455252 467 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 RN7SL443P-201ENST00000464331 290 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 AC018437.1-201ENST00000492214 406 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA4P43681 RNU6-64P-201ENST00000517119 105 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.13□□□□□ -1.59
CHRNA4P43681 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA4P43681 AC010186.2-204ENST00000537668 439 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 SUMO2P15-201ENST00000604285 278 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 AC034102.8-201ENST00000615146 484 ntBASIC5.13□□□□□ -1.59
CHRNA4P43681 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.13□□□□□ -1.59
CHRNA4P43681 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.13□□□□□ -1.59
CHRNA4P43681 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHRNA4P43681 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.13□□□□□ -1.59
CHRNA4P43681 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHRNA4P43681 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA4P43681 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.13□□□□□ -1.59
CHRNA4P43681 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
CHRNA4P43681 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 Z75746.1-201ENST00000440243 2080 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
CHRNA4P43681 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 Y_RNA.27-201ENST00000362540 103 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RNU6-1329P-201ENST00000365664 107 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 RNU1-106P-201ENST00000384382 164 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RNU6-1035P-201ENST00000384477 107 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RNU6-658P-201ENST00000384606 106 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RNU6-131P-201ENST00000391144 107 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 Y_RNA.586-201ENST00000391146 98 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.12□□□□□ -1.59
CHRNA4P43681 BX842559.1-201ENST00000419615 532 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 GNG5P5-201ENST00000420444 220 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 AL162725.1-201ENST00000435405 301 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RPL12P18-201ENST00000437175 325 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RPL34P20-201ENST00000442771 351 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 AC005532.2-201ENST00000467154 373 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 AC114982.1-201ENST00000469402 321 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 AC140059.1-201ENST00000489238 361 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 RPL23AP84-201ENST00000571193 464 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 MIR4273-201ENST00000582824 84 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 MIR4293-201ENST00000584305 78 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA4P43681 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 MTND1P7-201ENST00000632801 297 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 AL596275.2-204ENST00000641628 552 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 EOGT-210ENST00000615922 1931 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHRNA4P43681 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA4P43681 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 RLIMP1-201ENST00000339626 1680 ntBASIC5.12□□□□□ -1.59
CHRNA4P43681 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA4P43681 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA4P43681 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHRNA4P43681 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 RN7SKP113-201ENST00000363891 295 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 Y_RNA.439-201ENST00000384119 94 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 RNU6-918P-201ENST00000391219 106 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 PRRC2CP1-201ENST00000404428 159 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA4P43681 U3.36-201ENST00000408418 213 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 SNORA77-201ENST00000408716 125 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA4P43681 COX6CP13-201ENST00000428703 226 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA4P43681 RNU7-138P-201ENST00000459479 64 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 RN7SL727P-201ENST00000482164 296 ntBASIC5.11□□□□□ -1.59
CHRNA4P43681 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA4P43681 SNRPCP2-201ENST00000504370 475 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms