Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL356432.3-201ENST00000568952 465 ntBASIC3.53□□□□□ -1.84
HADHAP40939 AF131215.7-201ENST00000602443 707 ntBASIC3.53□□□□□ -1.84
HADHAP40939 AL355472.4-201ENST00000610233 626 ntBASIC3.53□□□□□ -1.84
HADHAP40939 SDR42E1P2-201ENST00000614861 481 ntBASIC3.53□□□□□ -1.84
HADHAP40939 AL138880.2-201ENST00000616214 239 ntBASIC3.53□□□□□ -1.84
HADHAP40939 AC009159.1-201ENST00000618386 642 ntBASIC3.53□□□□□ -1.84
HADHAP40939 AC091931.1-201ENST00000623488 728 ntBASIC3.53□□□□□ -1.84
HADHAP40939 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HADHAP40939 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.53□□□□□ -1.84
HADHAP40939 MTND4P4-201ENST00000439033 1366 ntBASIC3.52□□□□□ -1.85
HADHAP40939 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HADHAP40939 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HADHAP40939 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.52□□□□□ -1.85
HADHAP40939 RNU6-809P-201ENST00000384461 107 ntBASIC3.52□□□□□ -1.85
HADHAP40939 SKINT1L-201ENST00000401057 817 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC078974.1-201ENST00000411597 223 ntBASIC3.52□□□□□ -1.85
HADHAP40939 RPL7P8-201ENST00000411964 730 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 HSFY4P-201ENST00000415994 1181 ntBASIC3.52□□□□□ -1.85
HADHAP40939 RPS15AP6-201ENST00000420703 385 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.52□□□□□ -1.85
HADHAP40939 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.52□□□□□ -1.85
HADHAP40939 TAAR7P-201ENST00000436141 242 ntBASIC3.52□□□□□ -1.85
HADHAP40939 HSPD1P21-201ENST00000436541 245 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 AC009237.8-201ENST00000445492 379 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 KATNBL1P6-201ENST00000453433 915 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.52□□□□□ -1.85
HADHAP40939 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 AC010468.1-201ENST00000461022 817 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC008481.1-201ENST00000463278 396 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC116337.2-201ENST00000477662 156 ntBASIC3.52□□□□□ -1.85
HADHAP40939 RPL31P60-201ENST00000478450 367 ntBASIC3.52□□□□□ -1.85
HADHAP40939 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
HADHAP40939 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 DEFB108A-201ENST00000530110 222 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HADHAP40939 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 AF038458.1-201ENST00000588406 262 ntBASIC3.52□□□□□ -1.85
HADHAP40939 KC877982.1-201ENST00000602313 470 ntBASIC3.52□□□□□ -1.85
HADHAP40939 U3.45-201ENST00000607547 219 ntBASIC3.52□□□□□ -1.85
HADHAP40939 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.52□□□□□ -1.85
HADHAP40939 AC010133.1-201ENST00000615809 842 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC090132.2-201ENST00000615881 347 ntBASIC3.52□□□□□ -1.85
HADHAP40939 AC007494.3-201ENST00000624660 743 ntBASIC3.52□□□□□ -1.85
HADHAP40939 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HADHAP40939 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HADHAP40939 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HADHAP40939 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.51□□□□□ -1.85
HADHAP40939 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HADHAP40939 MIR30E-201ENST00000362104 92 ntBASIC3.51□□□□□ -1.85
HADHAP40939 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.51□□□□□ -1.85
HADHAP40939 RNU6-533P-201ENST00000384144 107 ntBASIC3.51□□□□□ -1.85
HADHAP40939 RNU2-62P-201ENST00000410868 191 ntBASIC3.51□□□□□ -1.85
HADHAP40939 RPL21P24-201ENST00000413752 448 ntBASIC3.51□□□□□ -1.85
HADHAP40939 RPS29P4-201ENST00000414733 161 ntBASIC3.51□□□□□ -1.85
HADHAP40939 DBIP2-201ENST00000419076 262 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AC006366.1-201ENST00000422002 759 ntBASIC3.51□□□□□ -1.85
HADHAP40939 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.51□□□□□ -1.85
HADHAP40939 RPS4XP22-201ENST00000480755 780 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AC104619.4-201ENST00000510773 249 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.51□□□□□ -1.85
HADHAP40939 AC103843.2-201ENST00000530523 682 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.51□□□□□ -1.85
HADHAP40939 AC011602.1-201ENST00000546484 331 ntBASIC3.51□□□□□ -1.85
HADHAP40939 HMGB1P14-201ENST00000557424 591 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.51□□□□□ -1.85
HADHAP40939 CLIC4P2-201ENST00000601934 717 ntBASIC3.51□□□□□ -1.85
HADHAP40939 AC121334.2-201ENST00000605387 271 ntBASIC3.51□□□□□ -1.85
HADHAP40939 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.51□□□□□ -1.85
HADHAP40939 AC069200.1-201ENST00000609511 323 ntBASIC3.51□□□□□ -1.85
HADHAP40939 SNHG22-203ENST00000617833 660 ntBASIC3.51□□□□□ -1.85
HADHAP40939 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.51□□□□□ -1.85
HADHAP40939 ZNF833P-201ENST00000424938 1494 ntBASIC3.51□□□□□ -1.85
HADHAP40939 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HADHAP40939 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HADHAP40939 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.51□□□□□ -1.85
HADHAP40939 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HADHAP40939 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.51□□□□□ -1.85
HADHAP40939 FAM35BP-202ENST00000497389 3337 ntBASIC3.5□□□□□ -1.85
HADHAP40939 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
HADHAP40939 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HADHAP40939 FRG1CP-201ENST00000358464 769 ntBASIC3.5□□□□□ -1.85
HADHAP40939 RNU6-1284P-201ENST00000363701 100 ntBASIC3.5□□□□□ -1.85
HADHAP40939 RNU5E-5P-201ENST00000365379 116 ntBASIC3.5□□□□□ -1.85
HADHAP40939 SNORA70.4-201ENST00000365509 134 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms