Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RXRBP28702 AL139276.1-201ENST00000311910 1001 ntBASIC5.53□□□□□ -1.52
RXRBP28702 RNU4-66P-201ENST00000365199 138 ntBASIC5.53□□□□□ -1.52
RXRBP28702 RNU6-1032P-201ENST00000384100 107 ntBASIC5.53□□□□□ -1.52
RXRBP28702 Y_RNA.530-201ENST00000384587 101 ntBASIC5.53□□□□□ -1.52
RXRBP28702 RNU6-903P-201ENST00000391270 109 ntBASIC5.53□□□□□ -1.52
RXRBP28702 MRPL42P3-201ENST00000401492 326 ntBASIC5.53□□□□□ -1.52
RXRBP28702 RNU2-3P-201ENST00000410144 191 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.53□□□□□ -1.52
RXRBP28702 HSPE1P12-201ENST00000412576 301 ntBASIC5.53□□□□□ -1.52
RXRBP28702 GSTM3P2-201ENST00000412746 530 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.53□□□□□ -1.52
RXRBP28702 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.53□□□□□ -1.52
RXRBP28702 AC018865.2-201ENST00000423631 129 ntBASIC5.53□□□□□ -1.52
RXRBP28702 RPS26P40-201ENST00000435209 294 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.53□□□□□ -1.52
RXRBP28702 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.53□□□□□ -1.52
RXRBP28702 AL035666.1-201ENST00000446195 348 ntBASIC5.53□□□□□ -1.52
RXRBP28702 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 AC010301.1-201ENST00000473936 355 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.53□□□□□ -1.52
RXRBP28702 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.53□□□□□ -1.52
RXRBP28702 RPL7P23-201ENST00000493874 747 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AC091885.1-201ENST00000506658 268 ntBASIC5.53□□□□□ -1.52
RXRBP28702 RNU6-764P-201ENST00000516396 105 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.53□□□□□ -1.52
RXRBP28702 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.53□□□□□ -1.52
RXRBP28702 PRPF19P1-201ENST00000584766 898 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AC104984.5-201ENST00000586878 94 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AC105224.1-201ENST00000587055 421 ntBASIC5.53□□□□□ -1.52
RXRBP28702 GLUD1P4-201ENST00000590914 418 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AL022099.1-201ENST00000604551 712 ntBASIC5.53□□□□□ -1.52
RXRBP28702 AC243654.2-201ENST00000612843 443 ntBASIC5.53□□□□□ -1.52
RXRBP28702 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.53□□□□□ -1.52
RXRBP28702 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RXRBP28702 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 MTND5P10-201ENST00000603719 1809 ntBASIC5.53□□□□□ -1.52
RXRBP28702 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RXRBP28702 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 AC004817.4-201ENST00000602396 3625 ntBASIC5.53□□□□□ -1.52
RXRBP28702 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RXRBP28702 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RXRBP28702 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RXRBP28702 RNU6-444P-201ENST00000383988 108 ntBASIC5.52□□□□□ -1.53
RXRBP28702 RNU6-39P-201ENST00000384344 107 ntBASIC5.52□□□□□ -1.53
RXRBP28702 RNU6-921P-201ENST00000384361 107 ntBASIC5.52□□□□□ -1.53
RXRBP28702 RNU4-70P-201ENST00000384579 139 ntBASIC5.52□□□□□ -1.53
RXRBP28702 SSXP10-201ENST00000402595 565 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC074085.1-201ENST00000413598 418 ntBASIC5.52□□□□□ -1.53
RXRBP28702 MCFD2P1-201ENST00000417812 300 ntBASIC5.52□□□□□ -1.53
RXRBP28702 MTCYBP10-201ENST00000424905 650 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.52□□□□□ -1.53
RXRBP28702 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RXRBP28702 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.52□□□□□ -1.53
RXRBP28702 MTND2P29-201ENST00000438595 412 ntBASIC5.52□□□□□ -1.53
RXRBP28702 RPL23AP15-201ENST00000450202 459 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC022431.1-201ENST00000450941 438 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC107399.1-201ENST00000451226 265 ntBASIC5.52□□□□□ -1.53
RXRBP28702 MTCO3P2-201ENST00000457365 171 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AL049714.1-201ENST00000466686 347 ntBASIC5.52□□□□□ -1.53
RXRBP28702 TRBV1-201ENST00000476502 284 ntBASIC5.52□□□□□ -1.53
RXRBP28702 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.52□□□□□ -1.53
RXRBP28702 AC104619.4-201ENST00000510773 249 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.52□□□□□ -1.53
RXRBP28702 AC009902.1-201ENST00000519351 183 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.52□□□□□ -1.53
RXRBP28702 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RXRBP28702 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.52□□□□□ -1.53
RXRBP28702 NCAPGP2-201ENST00000557911 754 ntBASIC5.52□□□□□ -1.53
RXRBP28702 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.52□□□□□ -1.53
RXRBP28702 BNIP3P25-201ENST00000596023 559 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AL121992.2-201ENST00000606262 256 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC022893.3-201ENST00000607665 437 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC130324.3-201ENST00000614165 542 ntBASIC5.52□□□□□ -1.53
RXRBP28702 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.52□□□□□ -1.53
RXRBP28702 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.52□□□□□ -1.53
RXRBP28702 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RXRBP28702 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RXRBP28702 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RXRBP28702 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RXRBP28702 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RXRBP28702 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RXRBP28702 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.51□□□□□ -1.53
RXRBP28702 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.51□□□□□ -1.53
RXRBP28702 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.51□□□□□ -1.53
RXRBP28702 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.51□□□□□ -1.53
RXRBP28702 AC134882.1-201ENST00000603738 1676 ntBASIC5.51□□□□□ -1.53
RXRBP28702 RNU6-1115P-201ENST00000362490 106 ntBASIC5.51□□□□□ -1.53
RXRBP28702 RNU6-552P-201ENST00000362869 119 ntBASIC5.51□□□□□ -1.53
RXRBP28702 RNU6-379P-201ENST00000363813 104 ntBASIC5.51□□□□□ -1.53
RXRBP28702 SET-203ENST00000372688 801 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms