Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.1□□□□□ -1.75
CD40P25942 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.1□□□□□ -1.75
CD40P25942 AC006270.2-201ENST00000578523 652 ntBASIC4.1□□□□□ -1.75
CD40P25942 MIR5692A1-201ENST00000580523 69 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC023043.2-201ENST00000589678 1026 ntBASIC4.1□□□□□ -1.75
CD40P25942 AL161729.3-201ENST00000603533 673 ntBASIC4.1□□□□□ -1.75
CD40P25942 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 MIR1302-2-201ENST00000607096 138 ntBASIC4.1□□□□□ -1.75
CD40P25942 SNORD91B-202ENST00000608459 222 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC064836.2-201ENST00000609491 462 ntBASIC4.1□□□□□ -1.75
CD40P25942 FAM157A-202ENST00000615155 405 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC126177.8-201ENST00000618339 1015 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.1□□□□□ -1.75
CD40P25942 MTND4LP32-201ENST00000636111 270 ntBASIC4.1□□□□□ -1.75
CD40P25942 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD40P25942 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CD40P25942 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CD40P25942 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CD40P25942 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.09□□□□□ -1.75
CD40P25942 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 SNORA70F-201ENST00000384142 135 ntBASIC4.09□□□□□ -1.75
CD40P25942 MIR578-201ENST00000384828 96 ntBASIC4.09□□□□□ -1.75
CD40P25942 MIR607-201ENST00000385241 96 ntBASIC4.09□□□□□ -1.75
CD40P25942 MIR1290-201ENST00000408735 78 ntBASIC4.09□□□□□ -1.75
CD40P25942 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40P25942 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD40P25942 RPS3AP52-201ENST00000435639 297 ntBASIC4.09□□□□□ -1.75
CD40P25942 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40P25942 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.09□□□□□ -1.75
CD40P25942 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40P25942 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40P25942 AC079168.2-201ENST00000453977 416 ntBASIC4.09□□□□□ -1.75
CD40P25942 RN7SL459P-201ENST00000481078 302 ntBASIC4.09□□□□□ -1.75
CD40P25942 AC026979.1-201ENST00000492525 396 ntBASIC4.09□□□□□ -1.75
CD40P25942 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40P25942 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.09□□□□□ -1.75
CD40P25942 RN7SKP24-201ENST00000515888 284 ntBASIC4.09□□□□□ -1.75
CD40P25942 RNU6-1069P-201ENST00000516612 133 ntBASIC4.09□□□□□ -1.75
CD40P25942 RNU6-143P-201ENST00000516942 93 ntBASIC4.09□□□□□ -1.75
CD40P25942 RN7SKP92-201ENST00000517266 244 ntBASIC4.09□□□□□ -1.75
CD40P25942 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40P25942 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.09□□□□□ -1.75
CD40P25942 AC004024.1-201ENST00000549244 247 ntBASIC4.09□□□□□ -1.75
CD40P25942 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.09□□□□□ -1.75
CD40P25942 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40P25942 MIR548AC-201ENST00000585049 88 ntBASIC4.09□□□□□ -1.75
CD40P25942 AC073539.2-201ENST00000597113 165 ntBASIC4.09□□□□□ -1.75
CD40P25942 AC008745.1-201ENST00000604064 271 ntBASIC4.09□□□□□ -1.75
CD40P25942 AL161798.1-201ENST00000604630 131 ntBASIC4.09□□□□□ -1.75
CD40P25942 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40P25942 AC090132.2-201ENST00000615881 347 ntBASIC4.09□□□□□ -1.75
CD40P25942 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40P25942 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.09□□□□□ -1.75
CD40P25942 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.09□□□□□ -1.75
CD40P25942 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CD40P25942 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CD40P25942 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CD40P25942 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.09□□□□□ -1.76
CD40P25942 AL136164.3-201ENST00000624429 3978 ntBASIC4.09□□□□□ -1.76
CD40P25942 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
CD40P25942 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
CD40P25942 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CD40P25942 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CD40P25942 RPL32P3-201ENST00000359025 275 ntBASIC4.08□□□□□ -1.76
CD40P25942 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 SNORD116-11-201ENST00000383882 92 ntBASIC4.08□□□□□ -1.76
CD40P25942 RNA5SP332-201ENST00000391063 115 ntBASIC4.08□□□□□ -1.76
CD40P25942 RN7SKP158-201ENST00000410453 326 ntBASIC4.08□□□□□ -1.76
CD40P25942 AC016397.1-201ENST00000412463 242 ntBASIC4.08□□□□□ -1.76
CD40P25942 RPL37P10-201ENST00000412884 288 ntBASIC4.08□□□□□ -1.76
CD40P25942 Z85995.1-201ENST00000415547 335 ntBASIC4.08□□□□□ -1.76
CD40P25942 AC140479.3-201ENST00000418944 1126 ntBASIC4.08□□□□□ -1.76
CD40P25942 NDUFB4P7-201ENST00000423198 363 ntBASIC4.08□□□□□ -1.76
CD40P25942 DNAJC19P7-201ENST00000428811 344 ntBASIC4.08□□□□□ -1.76
CD40P25942 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.08□□□□□ -1.76
CD40P25942 AC007919.1-201ENST00000429380 217 ntBASIC4.08□□□□□ -1.76
CD40P25942 AL356867.1-201ENST00000429623 299 ntBASIC4.08□□□□□ -1.76
CD40P25942 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms