Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGA1P17096 GTF2IP7-202ENST00000436677 309 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 HMGB1P38-201ENST00000490557 577 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGA1P17096 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGA1P17096 LDHBP3-201ENST00000514909 822 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 AP003033.1-201ENST00000527244 415 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGA1P17096 AC084364.2-201ENST00000546924 395 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGA1P17096 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 AC009090.3-201ENST00000616553 565 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGA1P17096 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGA1P17096 RNF6P1-201ENST00000444889 1784 ntBASIC1.42□□□□□ -2.18
HMGA1P17096 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGA1P17096 ZNF519P1-201ENST00000449011 1626 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGA1P17096 RNU4-51P-201ENST00000364206 140 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 Y_RNA.226-201ENST00000364337 114 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGA1P17096 GPM6BP3-201ENST00000442797 145 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGA1P17096 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 BZW1P2-201ENST00000473537 826 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGA1P17096 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGA1P17096 RNU2-44P-201ENST00000516795 194 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 AC022690.1-201ENST00000526681 550 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGA1P17096 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGA1P17096 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 AC145207.9-201ENST00000623802 325 ntBASIC1.41□□□□□ -2.18
HMGA1P17096 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGA1P17096 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGA1P17096 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGA1P17096 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGA1P17096 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGA1P17096 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGA1P17096 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGA1P17096 AL354685.2-201ENST00000448218 1447 ntBASIC1.4□□□□□ -2.18
HMGA1P17096 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.18
HMGA1P17096 MTND4P27-201ENST00000450813 1354 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGA1P17096 MIR676-201ENST00000390702 67 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 RPL23AP29-201ENST00000397284 453 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AC004022.2-201ENST00000413824 193 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AL512504.1-201ENST00000415494 778 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGA1P17096 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGA1P17096 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGA1P17096 Z85994.2-201ENST00000434327 452 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 RPS29P29-201ENST00000456396 171 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.4□□□□□ -2.19
HMGA1P17096 AC087879.1-201ENST00000474343 374 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AC105914.1-201ENST00000511798 226 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 CIR1P1-201ENST00000524055 1133 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGA1P17096 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGA1P17096 HSPE1P3-201ENST00000559254 309 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGA1P17096 MTCO1P40-201ENST00000574371 625 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGA1P17096 AC012640.5-201ENST00000623897 319 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 AC116563.2-201ENST00000624751 535 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGA1P17096 AC011477.1-204ENST00000623416 1325 ntBASIC1.4□□□□□ -2.19
HMGA1P17096 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGA1P17096 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGA1P17096 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGA1P17096 RNU6-53P-201ENST00000365367 106 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 AL034374.1-201ENST00000406329 351 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
HMGA1P17096 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 RPS6P15-201ENST00000431996 751 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGA1P17096 RPL7P18-201ENST00000478965 734 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 AL135752.1-201ENST00000479477 471 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 RPL30P11-201ENST00000495304 339 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGA1P17096 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGA1P17096 AC008739.2-201ENST00000597006 317 ntBASIC1.39□□□□□ -2.19
HMGA1P17096 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMGA1P17096 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.38□□□□□ -2.19
HMGA1P17096 RNU6-1181P-201ENST00000384191 106 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMGA1P17096 RN7SKP51-201ENST00000410781 304 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.38□□□□□ -2.19
HMGA1P17096 MTND4LP21-201ENST00000415303 295 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.38□□□□□ -2.19
HMGA1P17096 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.38□□□□□ -2.19
HMGA1P17096 RPL23AP16-201ENST00000441715 421 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms