Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.8□□□□□ -1.32
CD44P16070 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6.8□□□□□ -1.32
CD44P16070 AC091078.2-201ENST00000557145 559 ntBASIC6.8□□□□□ -1.32
CD44P16070 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.8□□□□□ -1.32
CD44P16070 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.8□□□□□ -1.32
CD44P16070 MIR6864-201ENST00000617935 70 ntBASIC6.8□□□□□ -1.32
CD44P16070 AC093535.2-201ENST00000624769 2326 ntBASIC6.8□□□□□ -1.32
CD44P16070 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC6.8□□□□□ -1.32
CD44P16070 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CD44P16070 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.79□□□□□ -1.32
CD44P16070 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 RNA5SP375-201ENST00000362975 119 ntBASIC6.79□□□□□ -1.32
CD44P16070 RNU6-873P-201ENST00000363833 107 ntBASIC6.79□□□□□ -1.32
CD44P16070 U3.40-201ENST00000408706 208 ntBASIC6.79□□□□□ -1.32
CD44P16070 RPL30P12-201ENST00000474666 353 ntBASIC6.79□□□□□ -1.32
CD44P16070 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC6.79□□□□□ -1.32
CD44P16070 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.79□□□□□ -1.32
CD44P16070 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.79□□□□□ -1.32
CD44P16070 AC006380.1-201ENST00000603598 186 ntBASIC6.79□□□□□ -1.32
CD44P16070 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.79□□□□□ -1.32
CD44P16070 AC007159.1-201ENST00000566529 4706 ntBASIC6.79□□□□□ -1.32
CD44P16070 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CD44P16070 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.79□□□□□ -1.32
CD44P16070 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 SAGE4P-201ENST00000442271 3381 ntBASIC6.79□□□□□ -1.32
CD44P16070 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 IQCB2P-201ENST00000401788 1633 ntBASIC6.79□□□□□ -1.32
CD44P16070 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.79□□□□□ -1.32
CD44P16070 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 SAGE2P-201ENST00000420011 2126 ntBASIC6.79□□□□□ -1.32
CD44P16070 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 AC007938.2-201ENST00000604666 2634 ntBASIC6.79□□□□□ -1.32
CD44P16070 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CD44P16070 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CD44P16070 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CD44P16070 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CD44P16070 AC007114.2-201ENST00000576014 4281 ntBASIC6.78□□□□□ -1.32
CD44P16070 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
CD44P16070 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
CD44P16070 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 AC092268.1-201ENST00000342691 405 ntBASIC6.78□□□□□ -1.32
CD44P16070 SNORD18B-201ENST00000365659 72 ntBASIC6.78□□□□□ -1.32
CD44P16070 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.78□□□□□ -1.32
CD44P16070 RPL17P36-201ENST00000420302 549 ntBASIC6.78□□□□□ -1.32
CD44P16070 RN7SL502P-201ENST00000481857 290 ntBASIC6.78□□□□□ -1.32
CD44P16070 RNA5SP434-201ENST00000516647 121 ntBASIC6.78□□□□□ -1.32
CD44P16070 AC093331.1-201ENST00000521474 169 ntBASIC6.78□□□□□ -1.32
CD44P16070 AC019288.1-201ENST00000557918 224 ntBASIC6.78□□□□□ -1.32
CD44P16070 MIR3157-201ENST00000578688 85 ntBASIC6.78□□□□□ -1.32
CD44P16070 AC131055.1-201ENST00000584626 316 ntBASIC6.78□□□□□ -1.32
CD44P16070 AL031274.2-201ENST00000599419 203 ntBASIC6.78□□□□□ -1.32
CD44P16070 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.78□□□□□ -1.32
CD44P16070 Y_RNA.818-201ENST00000618813 71 ntBASIC6.78□□□□□ -1.32
CD44P16070 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CD44P16070 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.78□□□□□ -1.32
CD44P16070 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CD44P16070 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CD44P16070 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CD44P16070 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CD44P16070 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.77□□□□□ -1.32
CD44P16070 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.77□□□□□ -1.32
CD44P16070 SNX18P3-202ENST00000565670 1750 ntBASIC6.77□□□□□ -1.33
CD44P16070 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.77□□□□□ -1.33
CD44P16070 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
CD44P16070 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 AC024651.2-201ENST00000562480 2098 ntBASIC6.77□□□□□ -1.33
CD44P16070 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CD44P16070 AC079741.1-201ENST00000321498 212 ntBASIC6.77□□□□□ -1.33
CD44P16070 RNU6-508P-201ENST00000363231 103 ntBASIC6.77□□□□□ -1.33
CD44P16070 RNU6-1205P-201ENST00000363625 106 ntBASIC6.77□□□□□ -1.33
CD44P16070 RNA5SP485-201ENST00000365053 119 ntBASIC6.77□□□□□ -1.33
CD44P16070 Y_RNA.323-201ENST00000365157 109 ntBASIC6.77□□□□□ -1.33
CD44P16070 SNORA64.3-201ENST00000365647 134 ntBASIC6.77□□□□□ -1.33
CD44P16070 RNU6-339P-201ENST00000384310 107 ntBASIC6.77□□□□□ -1.33
CD44P16070 MIR590-201ENST00000385008 97 ntBASIC6.77□□□□□ -1.33
CD44P16070 AL358075.3-201ENST00000426289 226 ntBASIC6.77□□□□□ -1.33
CD44P16070 RNA5SP367-201ENST00000516557 118 ntBASIC6.77□□□□□ -1.33
CD44P16070 AC137627.1-201ENST00000545761 289 ntBASIC6.77□□□□□ -1.33
CD44P16070 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.77□□□□□ -1.33
CD44P16070 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.77□□□□□ -1.33
CD44P16070 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.77□□□□□ -1.33
CD44P16070 AC012368.3-201ENST00000604190 219 ntBASIC6.77□□□□□ -1.33
CD44P16070 AC241585.2-209ENST00000638217 143 ntBASIC6.77□□□□□ -1.33
CD44P16070 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms