Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MIR627-201ENST00000384979 97 ntBASIC2.98□□□□□ -1.93
TOP1P11387 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.98□□□□□ -1.93
TOP1P11387 RNU2-47P-201ENST00000410649 186 ntBASIC2.98□□□□□ -1.93
TOP1P11387 RPS7P9-201ENST00000414704 586 ntBASIC2.98□□□□□ -1.93
TOP1P11387 BX682237.1-201ENST00000415016 335 ntBASIC2.98□□□□□ -1.93
TOP1P11387 MTCO2P17-201ENST00000424336 677 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP1P11387 AC090774.1-201ENST00000435925 246 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AC129850.1-201ENST00000436203 508 ntBASIC2.98□□□□□ -1.93
TOP1P11387 PTGES3P1-201ENST00000439531 483 ntBASIC2.98□□□□□ -1.93
TOP1P11387 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TOP1P11387 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TOP1P11387 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP1P11387 RNU6-420P-201ENST00000458780 107 ntBASIC2.98□□□□□ -1.93
TOP1P11387 KC877373.1-201ENST00000479066 408 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AC013828.1-201ENST00000481845 158 ntBASIC2.98□□□□□ -1.93
TOP1P11387 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP1P11387 AC113420.1-201ENST00000507903 571 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP1P11387 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP1P11387 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
TOP1P11387 RNA5SP320-201ENST00000516263 124 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.98□□□□□ -1.93
TOP1P11387 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.98□□□□□ -1.93
TOP1P11387 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
TOP1P11387 AC009097.3-201ENST00000563557 1018 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AC105224.1-201ENST00000587055 421 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AL356575.1-201ENST00000603008 283 ntBASIC2.98□□□□□ -1.93
TOP1P11387 RPAP2P1-201ENST00000603626 1168 ntBASIC2.98□□□□□ -1.93
TOP1P11387 AL355816.2-201ENST00000610049 647 ntBASIC2.98□□□□□ -1.93
TOP1P11387 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
TOP1P11387 AC025588.4-201ENST00000615802 908 ntBASIC2.98□□□□□ -1.93
TOP1P11387 VN1R7P-201ENST00000619242 903 ntBASIC2.98□□□□□ -1.93
TOP1P11387 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TOP1P11387 AC006378.2-201ENST00000623178 2476 ntBASIC2.98□□□□□ -1.93
TOP1P11387 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.98□□□□□ -1.93
TOP1P11387 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.97□□□□□ -1.93
TOP1P11387 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TOP1P11387 ZNF29P-201ENST00000225587 168 ntBASIC2.97□□□□□ -1.93
TOP1P11387 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.97□□□□□ -1.93
TOP1P11387 MIR217-201ENST00000384817 110 ntBASIC2.97□□□□□ -1.93
TOP1P11387 MIR135A2-201ENST00000384854 100 ntBASIC2.97□□□□□ -1.93
TOP1P11387 RNA5SP210-201ENST00000391034 120 ntBASIC2.97□□□□□ -1.93
TOP1P11387 RNU2-43P-201ENST00000410306 190 ntBASIC2.97□□□□□ -1.93
TOP1P11387 RNU2-28P-201ENST00000410457 189 ntBASIC2.97□□□□□ -1.93
TOP1P11387 AL449283.1-202ENST00000418249 604 ntBASIC2.97□□□□□ -1.93
TOP1P11387 MTCO3P1-205ENST00000422088 832 ntBASIC2.97□□□□□ -1.93
TOP1P11387 RPL7P37-201ENST00000425095 738 ntBASIC2.97□□□□□ -1.93
TOP1P11387 C1DP1-201ENST00000426049 402 ntBASIC2.97□□□□□ -1.93
TOP1P11387 AL365496.1-201ENST00000426885 215 ntBASIC2.97□□□□□ -1.93
TOP1P11387 Z93242.1-201ENST00000427102 353 ntBASIC2.97□□□□□ -1.93
TOP1P11387 RPL7L1P10-201ENST00000427790 463 ntBASIC2.97□□□□□ -1.93
TOP1P11387 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.97□□□□□ -1.93
TOP1P11387 Z80107.1-201ENST00000436830 412 ntBASIC2.97□□□□□ -1.93
TOP1P11387 OR10R1P-201ENST00000441524 1141 ntBASIC2.97□□□□□ -1.93
TOP1P11387 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TOP1P11387 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 AC108729.1-201ENST00000487812 947 ntBASIC2.97□□□□□ -1.93
TOP1P11387 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TOP1P11387 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TOP1P11387 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.97□□□□□ -1.93
TOP1P11387 RN7SKP24-201ENST00000515888 284 ntBASIC2.97□□□□□ -1.93
TOP1P11387 SNORA48.10-201ENST00000516965 160 ntBASIC2.97□□□□□ -1.93
TOP1P11387 NDUFS5P6-201ENST00000529136 295 ntBASIC2.97□□□□□ -1.93
TOP1P11387 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.97□□□□□ -1.93
TOP1P11387 MIR4509-3-201ENST00000578671 94 ntBASIC2.97□□□□□ -1.93
TOP1P11387 MIR4509-2-201ENST00000583920 94 ntBASIC2.97□□□□□ -1.93
TOP1P11387 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.97□□□□□ -1.93
TOP1P11387 AP000787.2-201ENST00000604432 568 ntBASIC2.97□□□□□ -1.93
TOP1P11387 AC092954.1-201ENST00000609121 445 ntBASIC2.97□□□□□ -1.93
TOP1P11387 AC004852.3-201ENST00000614131 326 ntBASIC2.97□□□□□ -1.93
TOP1P11387 MIR4509-1-201ENST00000618224 94 ntBASIC2.97□□□□□ -1.93
TOP1P11387 U4.3-201ENST00000621047 82 ntBASIC2.97□□□□□ -1.93
TOP1P11387 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.97□□□□□ -1.93
TOP1P11387 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.97□□□□□ -1.93
TOP1P11387 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TOP1P11387 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TOP1P11387 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TOP1P11387 RNU4-82P-201ENST00000362443 140 ntBASIC2.96□□□□□ -1.94
TOP1P11387 RNU6-492P-201ENST00000363035 104 ntBASIC2.96□□□□□ -1.94
TOP1P11387 RNU1-105P-201ENST00000363470 161 ntBASIC2.96□□□□□ -1.94
TOP1P11387 RNU6-1066P-201ENST00000363573 105 ntBASIC2.96□□□□□ -1.94
TOP1P11387 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TOP1P11387 RNA5SP354-201ENST00000391247 136 ntBASIC2.96□□□□□ -1.94
TOP1P11387 RPL7P27-201ENST00000403775 720 ntBASIC2.96□□□□□ -1.94
TOP1P11387 ARPC3P1-201ENST00000437218 533 ntBASIC2.96□□□□□ -1.94
TOP1P11387 AL358794.1-201ENST00000445689 381 ntBASIC2.96□□□□□ -1.94
TOP1P11387 AL513328.1-201ENST00000446460 224 ntBASIC2.96□□□□□ -1.94
TOP1P11387 USP9YP34-201ENST00000453983 808 ntBASIC2.96□□□□□ -1.94
TOP1P11387 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.96□□□□□ -1.94
TOP1P11387 RNU6-798P-201ENST00000516912 103 ntBASIC2.96□□□□□ -1.94
TOP1P11387 AC104417.1-201ENST00000523974 751 ntBASIC2.96□□□□□ -1.94
TOP1P11387 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.96□□□□□ -1.94
TOP1P11387 AMZ2P1-203ENST00000565833 850 ntBASIC2.96□□□□□ -1.94
TOP1P11387 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms