Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.89□□□□□ -1.79
PF4V1P10720 AL669831.1-202ENST00000428504 417 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PF4V1P10720 RHOT1P3-201ENST00000436571 331 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 GTF2IP13-201ENST00000438487 386 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 RPS29P9-201ENST00000440360 171 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.89□□□□□ -1.79
PF4V1P10720 AL691482.1-201ENST00000453255 87 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AC026979.1-201ENST00000492525 396 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.89□□□□□ -1.79
PF4V1P10720 RAB9BP1-201ENST00000519581 626 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.89□□□□□ -1.79
PF4V1P10720 CENPUP1-201ENST00000526649 1202 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.89□□□□□ -1.79
PF4V1P10720 AC091042.1-201ENST00000579213 173 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 MIR5583-1-201ENST00000580941 59 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 MIR3941-201ENST00000582572 103 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AC025946.2-201ENST00000603398 234 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
PF4V1P10720 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PF4V1P10720 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PF4V1P10720 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PF4V1P10720 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PF4V1P10720 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.89□□□□□ -1.79
PF4V1P10720 AC005183.1-201ENST00000603687 1979 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 AL672167.1-204ENST00000641875 3017 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 CASC19-280ENST00000642102 1351 ntBASIC3.89□□□□□ -1.79
PF4V1P10720 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
PF4V1P10720 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 ZFRP1-201ENST00000457579 2970 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.88□□□□□ -1.79
PF4V1P10720 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 Y_RNA.88-201ENST00000363029 99 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 SNORA56-201ENST00000383966 129 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 RNU6-45P-201ENST00000384471 107 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 RPS16P5-201ENST00000406501 404 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 U3.32-201ENST00000408116 212 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.88□□□□□ -1.79
PF4V1P10720 RPL17P36-201ENST00000420302 549 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.88□□□□□ -1.79
PF4V1P10720 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.88□□□□□ -1.79
PF4V1P10720 HMGN2P26-201ENST00000463169 339 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC004801.2-202ENST00000463559 283 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC008897.1-201ENST00000494006 347 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 Y_RNA.654-201ENST00000497848 106 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 MTCYBP18-201ENST00000501056 747 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 CCDC34P1-201ENST00000507441 517 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC008716.1-201ENST00000511084 513 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC134698.5-201ENST00000519444 336 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 BNIP3P1-201ENST00000547295 580 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.88□□□□□ -1.79
PF4V1P10720 MTCO3P23-201ENST00000561363 289 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.88□□□□□ -1.79
PF4V1P10720 AL355598.1-201ENST00000604169 202 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 BNIP3P10-201ENST00000605360 577 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC006111.3-201ENST00000622137 383 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.88□□□□□ -1.79
PF4V1P10720 AP003400.5-201ENST00000624827 617 ntBASIC3.88□□□□□ -1.79
PF4V1P10720 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.88□□□□□ -1.79
PF4V1P10720 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.88□□□□□ -1.79
PF4V1P10720 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PF4V1P10720 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PF4V1P10720 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.88□□□□□ -1.79
PF4V1P10720 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PF4V1P10720 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.87□□□□□ -1.79
PF4V1P10720 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.87□□□□□ -1.79
PF4V1P10720 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.87□□□□□ -1.79
PF4V1P10720 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 MIR578-201ENST00000384828 96 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 SNORA16.2-201ENST00000390991 127 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 MIR888-201ENST00000401186 77 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 MIR298-201ENST00000401212 88 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 RNU4-26P-201ENST00000410270 107 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 RPL21P90-201ENST00000415692 466 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 RPL21P91-201ENST00000429231 479 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AL121601.2-201ENST00000438019 707 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms