Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC104662.1-201ENST00000604448 511 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC100812.1-201ENST00000607622 580 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 Z82243.1-201ENST00000609432 473 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 uc_338.34-201ENST00000617467 174 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AL732372.2-225ENST00000642124 456 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AC244517.1-201ENST00000606030 2086 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.252-201ENST00000364556 101 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-99P-201ENST00000364721 107 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AL359837.1-201ENST00000381357 287 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-1062P-201ENST00000383908 107 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-1029P-201ENST00000384109 107 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-890P-201ENST00000384121 107 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AL139396.1-201ENST00000421137 167 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AL589765.3-201ENST00000446084 462 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 GSTA11P-201ENST00000452866 669 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 SNORD97-201ENST00000459187 142 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-256P-201ENST00000516747 97 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 RNA5SP503-201ENST00000517047 117 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AC090136.1-201ENST00000520009 240 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 MIR92B-201ENST00000607575 96 ntBASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC6.15□□□□□ -1.42
CSB-PGBD3P0DP91 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CSB-PGBD3P0DP91 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.15□□□□□ -1.43
CSB-PGBD3P0DP91 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
CSB-PGBD3P0DP91 SALL4P2-201ENST00000423288 2910 ntBASIC6.15□□□□□ -1.43
CSB-PGBD3P0DP91 AL022322.2-201ENST00000624072 20397 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 RNU1-94P-201ENST00000362627 173 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-179P-201ENST00000363350 107 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 SNORD113-7-201ENST00000363762 77 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.489-201ENST00000384410 101 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.496-201ENST00000384444 101 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 MIR23A-201ENST00000385245 73 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 RNU4-65P-201ENST00000410473 140 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 RPL23AP26-201ENST00000412728 464 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 OR6C66P-201ENST00000414917 930 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 UBE2FP1-201ENST00000416536 447 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 ARL5AP4-201ENST00000430731 512 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 PHBP16-201ENST00000446318 950 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 SCARNA10-201ENST00000459255 330 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 RPL21P129-201ENST00000491732 478 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 AC091167.1-201ENST00000492017 396 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.654-201ENST00000497848 106 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 AC097473.1-201ENST00000508142 408 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 MIR4458-201ENST00000578872 75 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 AC008013.2-202ENST00000637965 364 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 KPNA2P1-201ENST00000458289 1591 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 ZNF519P1-201ENST00000449011 1626 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 FAM91A3P-201ENST00000456826 2544 ntBASIC6.14□□□□□ -1.43
CSB-PGBD3P0DP91 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC121333.1-201ENST00000567488 2709 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.447-201ENST00000384184 113 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 RPL21P67-201ENST00000402896 478 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 RNU2-29P-201ENST00000410423 189 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AL359073.1-201ENST00000448036 403 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AL591623.2-201ENST00000449978 222 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 RN7SL98P-201ENST00000462271 300 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 UQCRHP4-201ENST00000471686 272 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 RPL7P23-201ENST00000493874 747 ntBASIC6.13□□□□□ -1.43
CSB-PGBD3P0DP91 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms