Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DEFB108D-201ENST00000527787 222 ntBASIC3.57□□□□□ -1.84
RB1P06400 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.57□□□□□ -1.84
RB1P06400 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.57□□□□□ -1.84
RB1P06400 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.57□□□□□ -1.84
RB1P06400 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.57□□□□□ -1.84
RB1P06400 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
RB1P06400 ROCK1P1-201ENST00000573767 549 ntBASIC3.57□□□□□ -1.84
RB1P06400 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC105224.1-201ENST00000587055 421 ntBASIC3.57□□□□□ -1.84
RB1P06400 Z99497.2-201ENST00000603634 310 ntBASIC3.57□□□□□ -1.84
RB1P06400 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.57□□□□□ -1.84
RB1P06400 AL110115.1-201ENST00000614396 364 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC012150.2-201ENST00000621300 544 ntBASIC3.57□□□□□ -1.84
RB1P06400 AL356321.1-201ENST00000621360 228 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC068057.2-201ENST00000624047 895 ntBASIC3.57□□□□□ -1.84
RB1P06400 AL159972.1-201ENST00000625150 448 ntBASIC3.57□□□□□ -1.84
RB1P06400 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.57□□□□□ -1.84
RB1P06400 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.57□□□□□ -1.84
RB1P06400 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RB1P06400 AL365361.1-201ENST00000566942 3481 ntBASIC3.57□□□□□ -1.84
RB1P06400 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
RB1P06400 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.56□□□□□ -1.84
RB1P06400 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.56□□□□□ -1.84
RB1P06400 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 CR381670.1-201ENST00000624291 1693 ntBASIC3.56□□□□□ -1.84
RB1P06400 RPL7P26-201ENST00000333817 754 ntBASIC3.56□□□□□ -1.84
RB1P06400 RNU5F-7P-201ENST00000363696 115 ntBASIC3.56□□□□□ -1.84
RB1P06400 RNU6-754P-201ENST00000391166 107 ntBASIC3.56□□□□□ -1.84
RB1P06400 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.56□□□□□ -1.84
RB1P06400 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 AC009518.2-201ENST00000418056 731 ntBASIC3.56□□□□□ -1.84
RB1P06400 AL390023.1-201ENST00000428836 262 ntBASIC3.56□□□□□ -1.84
RB1P06400 RPL35AP22-201ENST00000436855 335 ntBASIC3.56□□□□□ -1.84
RB1P06400 FTH1P1-201ENST00000437933 532 ntBASIC3.56□□□□□ -1.84
RB1P06400 UBE2D3P4-201ENST00000441973 436 ntBASIC3.56□□□□□ -1.84
RB1P06400 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RB1P06400 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RB1P06400 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
RB1P06400 AC025881.1-201ENST00000518851 512 ntBASIC3.56□□□□□ -1.84
RB1P06400 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 HMGN1P28-201ENST00000521340 364 ntBASIC3.56□□□□□ -1.84
RB1P06400 MTND4LP18-201ENST00000526864 291 ntBASIC3.56□□□□□ -1.84
RB1P06400 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.56□□□□□ -1.84
RB1P06400 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 AL162713.1-201ENST00000604480 262 ntBASIC3.56□□□□□ -1.84
RB1P06400 AC106900.2-201ENST00000604994 317 ntBASIC3.56□□□□□ -1.84
RB1P06400 MIR7106-201ENST00000612419 65 ntBASIC3.56□□□□□ -1.84
RB1P06400 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.56□□□□□ -1.84
RB1P06400 AC112204.3-201ENST00000623822 332 ntBASIC3.56□□□□□ -1.84
RB1P06400 MIR4275-201ENST00000636486 87 ntBASIC3.56□□□□□ -1.84
RB1P06400 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RB1P06400 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RB1P06400 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RB1P06400 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.56□□□□□ -1.84
RB1P06400 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RB1P06400 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
RB1P06400 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RB1P06400 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RB1P06400 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RB1P06400 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RB1P06400 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RB1P06400 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.55□□□□□ -1.84
RB1P06400 Y_RNA.46-201ENST00000362695 102 ntBASIC3.55□□□□□ -1.84
RB1P06400 RNU6-432P-201ENST00000384196 109 ntBASIC3.55□□□□□ -1.84
RB1P06400 SNORA44-201ENST00000384584 132 ntBASIC3.55□□□□□ -1.84
RB1P06400 UBE2V1P2-201ENST00000397758 440 ntBASIC3.55□□□□□ -1.84
RB1P06400 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
RB1P06400 MTCYBP36-201ENST00000404146 440 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC063979.1-201ENST00000415539 377 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.55□□□□□ -1.84
RB1P06400 AC090960.1-201ENST00000421072 306 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.55□□□□□ -1.84
RB1P06400 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.55□□□□□ -1.84
RB1P06400 ISCA1P2-201ENST00000438679 421 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC107083.1-201ENST00000439643 279 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC118469.1-201ENST00000442943 488 ntBASIC3.55□□□□□ -1.84
RB1P06400 AL592447.1-201ENST00000447592 540 ntBASIC3.55□□□□□ -1.84
RB1P06400 HMGB3P8-201ENST00000449709 577 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
RB1P06400 RPL23AP41-201ENST00000484754 458 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC055855.1-201ENST00000489563 579 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC135721.1-201ENST00000497954 479 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC114967.1-201ENST00000504890 259 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.55□□□□□ -1.84
RB1P06400 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.55□□□□□ -1.84
RB1P06400 SNORA70.16-201ENST00000516390 95 ntBASIC3.55□□□□□ -1.84
RB1P06400 AP000907.2-201ENST00000530827 353 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 AC026333.2-201ENST00000542164 106 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC022080.3-201ENST00000544433 482 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms