Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.27□□□□□ -1.89
VTNP04004 OR6K1P-201ENST00000456766 971 ntBASIC3.27□□□□□ -1.89
VTNP04004 AL136097.1-201ENST00000456945 913 ntBASIC3.27□□□□□ -1.89
VTNP04004 snoU13.8-201ENST00000458890 104 ntBASIC3.27□□□□□ -1.89
VTNP04004 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
VTNP04004 RPS4XP13-201ENST00000483219 789 ntBASIC3.27□□□□□ -1.89
VTNP04004 AP001025.2-201ENST00000490908 477 ntBASIC3.27□□□□□ -1.89
VTNP04004 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.27□□□□□ -1.89
VTNP04004 NDUFB4P9-201ENST00000511646 388 ntBASIC3.27□□□□□ -1.89
VTNP04004 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.27□□□□□ -1.89
VTNP04004 SNORA64.4-201ENST00000516632 81 ntBASIC3.27□□□□□ -1.89
VTNP04004 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.27□□□□□ -1.89
VTNP04004 AC060788.1-201ENST00000521318 469 ntBASIC3.27□□□□□ -1.89
VTNP04004 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.27□□□□□ -1.89
VTNP04004 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VTNP04004 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.27□□□□□ -1.89
VTNP04004 AC126177.3-201ENST00000551839 688 ntBASIC3.27□□□□□ -1.89
VTNP04004 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.27□□□□□ -1.89
VTNP04004 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
VTNP04004 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.27□□□□□ -1.89
VTNP04004 AP005136.1-201ENST00000579765 429 ntBASIC3.27□□□□□ -1.89
VTNP04004 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.27□□□□□ -1.89
VTNP04004 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.27□□□□□ -1.89
VTNP04004 AC009090.3-201ENST00000616553 565 ntBASIC3.27□□□□□ -1.89
VTNP04004 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.27□□□□□ -1.89
VTNP04004 CRYM-AS1-204ENST00000637983 556 ntBASIC3.27□□□□□ -1.89
VTNP04004 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VTNP04004 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
VTNP04004 AL049780.3-201ENST00000624612 1583 ntBASIC3.26□□□□□ -1.89
VTNP04004 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
VTNP04004 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTNP04004 AL161781.1-201ENST00000354277 403 ntBASIC3.26□□□□□ -1.89
VTNP04004 U3.4-201ENST00000363352 213 ntBASIC3.26□□□□□ -1.89
VTNP04004 SNORA18.3-201ENST00000384122 132 ntBASIC3.26□□□□□ -1.89
VTNP04004 SNORD51-201ENST00000384320 80 ntBASIC3.26□□□□□ -1.89
VTNP04004 U8.14-201ENST00000390843 143 ntBASIC3.26□□□□□ -1.89
VTNP04004 AL356421.1-201ENST00000403255 413 ntBASIC3.26□□□□□ -1.89
VTNP04004 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
VTNP04004 RNU2-47P-201ENST00000410649 186 ntBASIC3.26□□□□□ -1.89
VTNP04004 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.26□□□□□ -1.89
VTNP04004 RPL31P12-201ENST00000422587 358 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.26□□□□□ -1.89
VTNP04004 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.26□□□□□ -1.89
VTNP04004 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.26□□□□□ -1.89
VTNP04004 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.26□□□□□ -1.89
VTNP04004 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTNP04004 RPL21P104-201ENST00000464143 478 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
VTNP04004 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.26□□□□□ -1.89
VTNP04004 OR5G4P-201ENST00000525251 760 ntBASIC3.26□□□□□ -1.89
VTNP04004 HIGD1AP10-201ENST00000527837 282 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.26□□□□□ -1.89
VTNP04004 AC015871.2-201ENST00000603605 948 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC055876.5-201ENST00000605667 259 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC135507.1-201ENST00000607214 561 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC239868.4-201ENST00000608318 671 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC012531.5-201ENST00000611375 151 ntBASIC3.26□□□□□ -1.89
VTNP04004 AC027807.2-201ENST00000616099 408 ntBASIC3.26□□□□□ -1.89
VTNP04004 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
VTNP04004 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VTNP04004 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VTNP04004 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VTNP04004 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.25□□□□□ -1.89
VTNP04004 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VTNP04004 OR5J1P-201ENST00000313544 939 ntBASIC3.25□□□□□ -1.89
VTNP04004 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VTNP04004 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VTNP04004 RNU6-97P-201ENST00000363387 104 ntBASIC3.25□□□□□ -1.89
VTNP04004 RNU6-1207P-201ENST00000384343 107 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.25□□□□□ -1.89
VTNP04004 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 BX119904.4-201ENST00000424402 301 ntBASIC3.25□□□□□ -1.89
VTNP04004 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 AC236972.1-201ENST00000433225 199 ntBASIC3.25□□□□□ -1.89
VTNP04004 RPL37P21-201ENST00000435890 276 ntBASIC3.25□□□□□ -1.89
VTNP04004 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.25□□□□□ -1.89
VTNP04004 HMGB1P12-201ENST00000438594 598 ntBASIC3.25□□□□□ -1.89
VTNP04004 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.25□□□□□ -1.89
VTNP04004 BMI1P1-201ENST00000445879 941 ntBASIC3.25□□□□□ -1.89
VTNP04004 CEACAMP4-201ENST00000457676 421 ntBASIC3.25□□□□□ -1.89
VTNP04004 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
VTNP04004 UBE2DNL-203ENST00000474922 222 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC116337.2-201ENST00000477662 156 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC083906.5-201ENST00000503722 328 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 HMGB3P15-201ENST00000507326 574 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.25□□□□□ -1.89
VTNP04004 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 AC025881.1-201ENST00000518851 512 ntBASIC3.25□□□□□ -1.89
VTNP04004 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
VTNP04004 MTND4LP18-201ENST00000526864 291 ntBASIC3.25□□□□□ -1.89
VTNP04004 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VTNP04004 AC068587.4-201ENST00000533893 186 ntBASIC3.25□□□□□ -1.89
VTNP04004 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VTNP04004 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.25□□□□□ -1.89
VTNP04004 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms