Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.493-201ENST00000384422 102 ntBASIC1.67□□□□□ -2.14
TNFP01375 MCTS2P-201ENST00000394552 546 ntBASIC1.67□□□□□ -2.14
TNFP01375 AL356379.1-201ENST00000414105 126 ntBASIC1.67□□□□□ -2.14
TNFP01375 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.67□□□□□ -2.14
TNFP01375 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.67□□□□□ -2.14
TNFP01375 UBE2FP3-201ENST00000436366 524 ntBASIC1.67□□□□□ -2.14
TNFP01375 XKRY2-201ENST00000442362 1093 ntBASIC1.67□□□□□ -2.14
TNFP01375 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.67□□□□□ -2.14
TNFP01375 CDC42P1-201ENST00000456658 548 ntBASIC1.67□□□□□ -2.14
TNFP01375 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.67□□□□□ -2.14
TNFP01375 SNORA31.18-201ENST00000517043 134 ntBASIC1.67□□□□□ -2.14
TNFP01375 BTF3P12-201ENST00000519620 469 ntBASIC1.67□□□□□ -2.14
TNFP01375 SNRPGP16-201ENST00000533275 226 ntBASIC1.67□□□□□ -2.14
TNFP01375 GNAI2P1-201ENST00000541815 315 ntBASIC1.67□□□□□ -2.14
TNFP01375 OR11H5P-201ENST00000554039 926 ntBASIC1.67□□□□□ -2.14
TNFP01375 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.67□□□□□ -2.14
TNFP01375 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.67□□□□□ -2.14
TNFP01375 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
TNFP01375 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
TNFP01375 HPVC1-201ENST00000629899 1198 ntBASIC1.67□□□□□ -2.14
TNFP01375 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TNFP01375 RNU5D-1-201ENST00000363299 116 ntBASIC1.66□□□□□ -2.14
TNFP01375 MIR17-201ENST00000385012 84 ntBASIC1.66□□□□□ -2.14
TNFP01375 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
TNFP01375 SNORA46.1-201ENST00000391069 153 ntBASIC1.66□□□□□ -2.14
TNFP01375 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.66□□□□□ -2.14
TNFP01375 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFP01375 AC108667.1-201ENST00000428618 249 ntBASIC1.66□□□□□ -2.14
TNFP01375 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.66□□□□□ -2.14
TNFP01375 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFP01375 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFP01375 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.66□□□□□ -2.14
TNFP01375 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFP01375 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.66□□□□□ -2.14
TNFP01375 NDUFB4P2-201ENST00000509515 391 ntBASIC1.66□□□□□ -2.14
TNFP01375 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFP01375 AC117532.1-201ENST00000514638 323 ntBASIC1.66□□□□□ -2.14
TNFP01375 HMGN1P28-201ENST00000521340 364 ntBASIC1.66□□□□□ -2.14
TNFP01375 OR5AQ1P-201ENST00000527596 927 ntBASIC1.66□□□□□ -2.14
TNFP01375 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFP01375 AC008749.1-201ENST00000597650 306 ntBASIC1.66□□□□□ -2.14
TNFP01375 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.66□□□□□ -2.14
TNFP01375 OR10AB1P-201ENST00000609613 938 ntBASIC1.66□□□□□ -2.14
TNFP01375 AC010872.1-201ENST00000624225 675 ntBASIC1.66□□□□□ -2.14
TNFP01375 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TNFP01375 MTND4P23-201ENST00000447723 1363 ntBASIC1.65□□□□□ -2.15
TNFP01375 RNU6-457P-201ENST00000363999 107 ntBASIC1.65□□□□□ -2.15
TNFP01375 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TNFP01375 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFP01375 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.65□□□□□ -2.15
TNFP01375 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFP01375 AC007560.1-201ENST00000426912 237 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC009414.1-201ENST00000427200 443 ntBASIC1.65□□□□□ -2.15
TNFP01375 NDUFB4P6-201ENST00000436819 366 ntBASIC1.65□□□□□ -2.15
TNFP01375 ARF4P4-201ENST00000439608 520 ntBASIC1.65□□□□□ -2.15
TNFP01375 RPS26P30-201ENST00000443431 335 ntBASIC1.65□□□□□ -2.15
TNFP01375 UBE2V2P4-201ENST00000447495 259 ntBASIC1.65□□□□□ -2.15
TNFP01375 SSXP1-201ENST00000453640 473 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.65□□□□□ -2.15
TNFP01375 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.65□□□□□ -2.15
TNFP01375 AC118942.1-201ENST00000529674 1035 ntBASIC1.65□□□□□ -2.15
TNFP01375 CYCSP26-201ENST00000534107 320 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.65□□□□□ -2.15
TNFP01375 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.65□□□□□ -2.15
TNFP01375 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFP01375 AC067805.1-201ENST00000559344 470 ntBASIC1.65□□□□□ -2.15
TNFP01375 AL049838.1-201ENST00000563647 981 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC023824.2-201ENST00000566185 400 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
TNFP01375 AL669831.4-202ENST00000590817 238 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC025588.4-201ENST00000615802 908 ntBASIC1.65□□□□□ -2.15
TNFP01375 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC091953.2-201ENST00000623979 160 ntBASIC1.65□□□□□ -2.15
TNFP01375 OR1S1-201ENST00000624470 978 ntBASIC1.65□□□□□ -2.15
TNFP01375 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.65□□□□□ -2.15
TNFP01375 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.65□□□□□ -2.15
TNFP01375 AC006026.1-201ENST00000444025 1803 ntBASIC1.65□□□□□ -2.15
TNFP01375 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TNFP01375 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
TNFP01375 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TNFP01375 AC009487.4-201ENST00000624969 3585 ntBASIC1.64□□□□□ -2.15
TNFP01375 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TNFP01375 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TNFP01375 RNA5SP258-201ENST00000362750 119 ntBASIC1.64□□□□□ -2.15
TNFP01375 RNU6-1243P-201ENST00000364028 107 ntBASIC1.64□□□□□ -2.15
TNFP01375 SNORA16B-201ENST00000364674 135 ntBASIC1.64□□□□□ -2.15
TNFP01375 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.64□□□□□ -2.15
TNFP01375 MIR493-201ENST00000385254 89 ntBASIC1.64□□□□□ -2.15
TNFP01375 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TNFP01375 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.64□□□□□ -2.15
TNFP01375 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 HMGN2P19-201ENST00000425149 265 ntBASIC1.64□□□□□ -2.15
TNFP01375 HMGB1P27-201ENST00000431429 603 ntBASIC1.64□□□□□ -2.15
TNFP01375 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TNFP01375 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFP01375 RPL7P12-201ENST00000446719 750 ntBASIC1.64□□□□□ -2.15
TNFP01375 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TNFP01375 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.64□□□□□ -2.15
TNFP01375 AL359385.1-201ENST00000456509 365 ntBASIC1.64□□□□□ -2.15
TNFP01375 RN7SL274P-201ENST00000492268 272 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms