Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
POLR1AO95602 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
POLR1AO95602 AC016769.3-201ENST00000396562 315 ntBASIC2.02□□□□□ -2.09
POLR1AO95602 AP000567.1-201ENST00000406413 156 ntBASIC2.02□□□□□ -2.09
POLR1AO95602 Z85994.2-201ENST00000434327 452 ntBASIC2.02□□□□□ -2.09
POLR1AO95602 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.02□□□□□ -2.09
POLR1AO95602 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.02□□□□□ -2.09
POLR1AO95602 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.02□□□□□ -2.09
POLR1AO95602 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.02□□□□□ -2.09
POLR1AO95602 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.02□□□□□ -2.09
POLR1AO95602 AC007229.1-201ENST00000590455 412 ntBASIC2.02□□□□□ -2.09
POLR1AO95602 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
POLR1AO95602 RNU4-41P-201ENST00000364426 143 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 MIR1304-201ENST00000408243 91 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 MTND3P6-201ENST00000485242 339 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1AO95602 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.01□□□□□ -2.09
POLR1AO95602 MIR4474-201ENST00000579189 78 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.01□□□□□ -2.09
POLR1AO95602 AC011712.1-201ENST00000588959 234 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 HSPE1P14-201ENST00000605812 302 ntBASIC2.01□□□□□ -2.09
POLR1AO95602 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.01□□□□□ -2.09
POLR1AO95602 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
POLR1AO95602 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
POLR1AO95602 MTND4LP13-201ENST00000425022 298 ntBASIC2□□□□□ -2.09
POLR1AO95602 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2□□□□□ -2.09
POLR1AO95602 HMGB1P26-201ENST00000452520 628 ntBASIC2□□□□□ -2.09
POLR1AO95602 AC096992.1-201ENST00000459808 709 ntBASIC2□□□□□ -2.09
POLR1AO95602 MTCYBP18-201ENST00000501056 747 ntBASIC2□□□□□ -2.09
POLR1AO95602 FAM106DP-201ENST00000586416 501 ntBASIC2□□□□□ -2.09
POLR1AO95602 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2□□□□□ -2.09
POLR1AO95602 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2□□□□□ -2.09
POLR1AO95602 SNORD108-201ENST00000459332 71 ntBASIC2□□□□□ -2.09
POLR1AO95602 RNU7-157P-201ENST00000459600 66 ntBASIC2□□□□□ -2.09
POLR1AO95602 RNA5SP61-201ENST00000516453 100 ntBASIC2□□□□□ -2.09
POLR1AO95602 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
POLR1AO95602 SUB1P1-201ENST00000524415 382 ntBASIC2□□□□□ -2.09
POLR1AO95602 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 AC068338.1-201ENST00000565567 176 ntBASIC2□□□□□ -2.09
POLR1AO95602 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2□□□□□ -2.09
POLR1AO95602 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
POLR1AO95602 TPMTP3-201ENST00000411928 735 ntBASIC1.99□□□□□ -2.09
POLR1AO95602 AP002345.1-201ENST00000456493 928 ntBASIC1.99□□□□□ -2.09
POLR1AO95602 AC093801.2-201ENST00000503966 1050 ntBASIC1.99□□□□□ -2.09
POLR1AO95602 AC093767.1-201ENST00000504523 156 ntBASIC1.99□□□□□ -2.09
POLR1AO95602 AC022634.1-201ENST00000520765 532 ntBASIC1.99□□□□□ -2.09
POLR1AO95602 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.99□□□□□ -2.09
POLR1AO95602 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.99□□□□□ -2.09
POLR1AO95602 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.99□□□□□ -2.09
POLR1AO95602 MIR4458-201ENST00000578872 75 ntBASIC1.99□□□□□ -2.09
POLR1AO95602 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
POLR1AO95602 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
POLR1AO95602 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
POLR1AO95602 MTND5P10-201ENST00000603719 1809 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.98□□□□□ -2.09
POLR1AO95602 AC093084.1-201ENST00000424233 687 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.98□□□□□ -2.09
POLR1AO95602 BMI1P1-201ENST00000445879 941 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 SETP7-201ENST00000552169 453 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 AC068135.2-201ENST00000569293 1028 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 AC091895.1-201ENST00000624494 256 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 MIR203B-201ENST00000636080 86 ntBASIC1.98□□□□□ -2.09
POLR1AO95602 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
POLR1AO95602 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
POLR1AO95602 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.97□□□□□ -2.09
POLR1AO95602 Y_RNA.205-201ENST00000364128 113 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 RN7SKP51-201ENST00000410781 304 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AL590233.1-201ENST00000430017 456 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 CKS1BP5-201ENST00000434172 273 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 RBM43P1-201ENST00000476891 1081 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC092902.1-201ENST00000486999 259 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 RN7SKP34-201ENST00000516142 244 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC090821.2-201ENST00000523552 176 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AL138976.2-201ENST00000563989 694 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC023813.2-201ENST00000564321 469 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC008962.1-201ENST00000605729 304 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC097468.3-201ENST00000607956 456 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC097504.2-201ENST00000608088 454 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 AC006329.2-201ENST00000611491 394 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
POLR1AO95602 PABPC1P7-201ENST00000413177 1513 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 ERHP2-201ENST00000402323 299 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 RFESDP1-201ENST00000422350 461 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
POLR1AO95602 AC005730.3-201ENST00000583067 366 ntBASIC1.97□□□□□ -2.09
POLR1AO95602 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
POLR1AO95602 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
POLR1AO95602 RPS12P24-201ENST00000412619 387 ntBASIC1.96□□□□□ -2.1
POLR1AO95602 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.96□□□□□ -2.1
POLR1AO95602 SUMO2P6-201ENST00000505273 288 ntBASIC1.96□□□□□ -2.1
POLR1AO95602 MTCO3P24-201ENST00000572729 782 ntBASIC1.96□□□□□ -2.1
POLR1AO95602 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms