Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC146507.1-201ENST00000468335 354 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC023598.1-201ENST00000472521 361 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC005476.1-201ENST00000554427 397 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL845331.3-202ENST00000562856 261 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL356432.3-201ENST00000568952 465 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 BNIP3P10-201ENST00000605360 577 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL161734.1-201ENST00000609720 557 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL590282.1-201ENST00000610379 1136 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC105429.2-201ENST00000610567 517 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL136964.1-201ENST00000622038 2990 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC091925.2-201ENST00000625059 256 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAPGEF3O95398 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.13□□□□□ -1.59
RAPGEF3O95398 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAPGEF3O95398 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAPGEF3O95398 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAPGEF3O95398 Y_RNA.372-201ENST00000365599 102 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RAPGEF3O95398 Y_RNA.604-201ENST00000410574 102 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 RNU4-55P-201ENST00000410731 137 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 AC233728.2-201ENST00000425348 757 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 RWDD4P2-201ENST00000426392 563 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 SETP5-201ENST00000437270 562 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AL451074.3-201ENST00000437709 472 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 AC013267.1-201ENST00000458227 267 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 RNA5SP356-201ENST00000515972 94 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 Vault.3-201ENST00000516676 95 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AP003497.1-201ENST00000528472 562 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AP000907.2-201ENST00000530827 353 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAPGEF3O95398 OR8L1P-201ENST00000534005 955 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 MTCO3P24-201ENST00000572729 782 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 MIR3162-201ENST00000581818 82 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AC068790.3-201ENST00000602988 553 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 AP002360.4-201ENST00000606980 481 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 RNVU1-4-201ENST00000612985 164 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 MIR6715B-201ENST00000637172 77 ntBASIC5.12□□□□□ -1.59
RAPGEF3O95398 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RAPGEF3O95398 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RAPGEF3O95398 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 RNU4-12P-201ENST00000365233 139 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC127391.1-201ENST00000411737 98 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC127526.1-201ENST00000417526 366 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC073464.1-201ENST00000429823 534 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 MTND1P2-201ENST00000430604 821 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 ELOCP18-201ENST00000434209 337 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 MTATP6P23-201ENST00000440153 476 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AL121769.1-201ENST00000469473 401 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 RNU6-27P-201ENST00000516146 107 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 OR4R3P-201ENST00000525084 838 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AP003385.6-201ENST00000531603 374 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 MIR3118-1-201ENST00000581787 76 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 LLPHP1-201ENST00000603571 367 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AL139286.1-201ENST00000604465 483 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AP003117.2-201ENST00000606010 545 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC092954.2-201ENST00000609103 430 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AL355472.4-201ENST00000610233 626 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AC006329.2-201ENST00000611491 394 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 AL133173.2-201ENST00000614270 90 ntBASIC5.11□□□□□ -1.59
RAPGEF3O95398 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.11□□□□□ -1.59
RAPGEF3O95398 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RAPGEF3O95398 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
RAPGEF3O95398 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
RAPGEF3O95398 RNU1-18P-201ENST00000363062 164 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 AL590002.1-201ENST00000406554 418 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.1□□□□□ -1.59
RAPGEF3O95398 RPL31P35-201ENST00000431058 377 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 FCF1P1-201ENST00000432690 571 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.1□□□□□ -1.59
RAPGEF3O95398 AL353572.1-201ENST00000442490 417 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 Z99127.3-201ENST00000448158 395 ntBASIC5.1□□□□□ -1.59
RAPGEF3O95398 RPL29P29-201ENST00000448725 423 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms