Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF40O75150 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF40O75150 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
RNF40O75150 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF40O75150 AC010329.2-201ENST00000595195 2737 ntBASIC6.09□□□□□ -1.43
RNF40O75150 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RNF40O75150 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF40O75150 RN7SKP160-201ENST00000363804 340 ntBASIC6.09□□□□□ -1.43
RNF40O75150 Y_RNA.215-201ENST00000364204 112 ntBASIC6.09□□□□□ -1.43
RNF40O75150 GLULP6-201ENST00000399502 913 ntBASIC6.09□□□□□ -1.43
RNF40O75150 AC016739.1-201ENST00000405359 345 ntBASIC6.09□□□□□ -1.43
RNF40O75150 DPPA2P3-201ENST00000411853 655 ntBASIC6.09□□□□□ -1.43
RNF40O75150 AC073587.1-201ENST00000447093 876 ntBASIC6.09□□□□□ -1.43
RNF40O75150 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF40O75150 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF40O75150 RN7SL466P-201ENST00000497546 295 ntBASIC6.09□□□□□ -1.43
RNF40O75150 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF40O75150 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF40O75150 GSTP1P1-201ENST00000548078 319 ntBASIC6.09□□□□□ -1.43
RNF40O75150 TXNP4-201ENST00000575018 310 ntBASIC6.09□□□□□ -1.43
RNF40O75150 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF40O75150 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF40O75150 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF40O75150 AL691477.1-201ENST00000624398 162 ntBASIC6.09□□□□□ -1.43
RNF40O75150 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
RNF40O75150 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF40O75150 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF40O75150 AC007938.2-201ENST00000604666 2634 ntBASIC6.09□□□□□ -1.44
RNF40O75150 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.09□□□□□ -1.44
RNF40O75150 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
RNF40O75150 AC023421.1-201ENST00000590535 1785 ntBASIC6.08□□□□□ -1.44
RNF40O75150 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF40O75150 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF40O75150 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 Y_RNA.308-201ENST00000365043 101 ntBASIC6.08□□□□□ -1.44
RNF40O75150 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF40O75150 OR2AT2P-201ENST00000413438 905 ntBASIC6.08□□□□□ -1.44
RNF40O75150 RNU7-87P-201ENST00000459343 62 ntBASIC6.08□□□□□ -1.44
RNF40O75150 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF40O75150 SUMO2P6-201ENST00000505273 288 ntBASIC6.08□□□□□ -1.44
RNF40O75150 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF40O75150 AC018442.3-201ENST00000523025 183 ntBASIC6.08□□□□□ -1.44
RNF40O75150 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF40O75150 MIR4423-201ENST00000580922 80 ntBASIC6.08□□□□□ -1.44
RNF40O75150 FO393422.1-201ENST00000603908 708 ntBASIC6.08□□□□□ -1.44
RNF40O75150 AC037487.3-201ENST00000606668 112 ntBASIC6.08□□□□□ -1.44
RNF40O75150 uc_338.26-201ENST00000612659 160 ntBASIC6.08□□□□□ -1.44
RNF40O75150 AC004852.3-201ENST00000614131 326 ntBASIC6.08□□□□□ -1.44
RNF40O75150 MIR6719-201ENST00000622428 87 ntBASIC6.08□□□□□ -1.44
RNF40O75150 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF40O75150 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF40O75150 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF40O75150 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RNF40O75150 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RNF40O75150 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF40O75150 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RNF40O75150 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 RNA5SP132-201ENST00000364725 118 ntBASIC6.07□□□□□ -1.44
RNF40O75150 RNU6-449P-201ENST00000383914 107 ntBASIC6.07□□□□□ -1.44
RNF40O75150 Y_RNA.569-201ENST00000384749 103 ntBASIC6.07□□□□□ -1.44
RNF40O75150 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RNF40O75150 ENSAP1-201ENST00000392855 326 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AC013442.1-201ENST00000397347 228 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF40O75150 AC022431.1-201ENST00000450941 438 ntBASIC6.07□□□□□ -1.44
RNF40O75150 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 RPS29P27-201ENST00000463711 170 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AC034236.1-201ENST00000469891 373 ntBASIC6.07□□□□□ -1.44
RNF40O75150 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF40O75150 AC022493.1-201ENST00000492984 337 ntBASIC6.07□□□□□ -1.44
RNF40O75150 IGLV2-28-201ENST00000520681 304 ntBASIC6.07□□□□□ -1.44
RNF40O75150 EIF4A2P5-201ENST00000529914 499 ntBASIC6.07□□□□□ -1.44
RNF40O75150 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF40O75150 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 MIR1273E-201ENST00000581165 102 ntBASIC6.07□□□□□ -1.44
RNF40O75150 MIR4505-201ENST00000582238 73 ntBASIC6.07□□□□□ -1.44
RNF40O75150 NF1P5-201ENST00000588287 448 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AC119403.2-201ENST00000590960 598 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AP000787.2-201ENST00000604432 568 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AC084757.4-201ENST00000616350 526 ntBASIC6.07□□□□□ -1.44
RNF40O75150 AC073349.3-201ENST00000617616 186 ntBASIC6.07□□□□□ -1.44
RNF40O75150 PROS2P-201ENST00000474651 1951 ntBASIC6.07□□□□□ -1.44
RNF40O75150 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF40O75150 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF40O75150 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF40O75150 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 AL078621.3-201ENST00000623707 2042 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms