Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC011477.5-201ENST00000586571 259 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC011445.2-201ENST00000599274 173 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 AP001486.3-201ENST00000615334 372 ntBASIC4.52□□□□□ -1.69
TRIM13O60858 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM13O60858 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TRIM13O60858 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM13O60858 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM13O60858 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRIM13O60858 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRIM13O60858 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 Y_RNA.14-201ENST00000362415 103 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 U8.4-201ENST00000363626 134 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RNU6-770P-201ENST00000363929 105 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 SNORA20.1-201ENST00000364790 130 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 Y_RNA.291-201ENST00000364886 113 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM13O60858 RNU6-171P-201ENST00000384354 107 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 Y_RNA.562-201ENST00000384695 113 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 MT-TW-201ENST00000387382 68 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AL445529.1-201ENST00000398713 389 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RN7SKP267-201ENST00000410381 285 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RN7SKP235-201ENST00000410662 305 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RNU2-38P-201ENST00000410856 79 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM13O60858 MTCO3P19-201ENST00000415864 321 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 CYCSP10-201ENST00000417973 294 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL137014.1-201ENST00000420490 1226 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL358176.3-201ENST00000420757 454 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM13O60858 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 RPL21P133-201ENST00000443666 476 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AC073587.1-201ENST00000447093 876 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 HIGD1AP13-201ENST00000509878 289 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RNA5SP228-201ENST00000516232 133 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 Y_RNA.670-201ENST00000516255 105 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AC008694.2-201ENST00000517591 306 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM13O60858 AC011979.2-201ENST00000527568 352 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 DEFB109D-201ENST00000529497 240 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM13O60858 AC063949.1-201ENST00000552900 865 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 OR11H5P-201ENST00000554039 926 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 MTND6P33-201ENST00000571794 183 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 MIR3176-201ENST00000582210 90 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM13O60858 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM13O60858 SNORD58B-201ENST00000607313 66 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AC133644.2-201ENST00000608142 540 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM13O60858 MIR6128-201ENST00000615528 109 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AC000123.2-201ENST00000623124 461 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL159972.1-201ENST00000625150 448 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 AL512643.1-201ENST00000635735 524 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM13O60858 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AC007529.1-201ENST00000418574 2178 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 AL592148.3-201ENST00000608771 2646 ntBASIC4.51□□□□□ -1.69
TRIM13O60858 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM13O60858 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TRIM13O60858 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
TRIM13O60858 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 AC244517.1-201ENST00000606030 2086 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM13O60858 U3.11-201ENST00000364476 212 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RNU6-641P-201ENST00000384006 107 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RNU6-746P-201ENST00000384112 109 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 Y_RNA.485-201ENST00000384395 102 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 Z98745.1-201ENST00000402553 494 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
TRIM13O60858 Y_RNA.594-201ENST00000410373 140 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RNU6-1050P-201ENST00000410388 107 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC093162.1-201ENST00000419682 124 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM13O60858 AL590135.1-201ENST00000422215 156 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms