Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 RNU6-1097P-201ENST00000363586 107 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 Y_RNA.409-201ENST00000383990 98 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 RNU6-456P-201ENST00000384493 107 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ZIC3O60481 PTMAP2-201ENST00000397627 327 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AL590002.1-201ENST00000406554 418 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 BTF3P7-201ENST00000407097 488 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 RPL21P24-201ENST00000413752 448 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 RPL23AP30-201ENST00000432419 501 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 GPR143P-201ENST00000434155 205 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 RPS15AP9-201ENST00000439856 381 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AL356535.1-201ENST00000440335 398 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 MTCO3P45-201ENST00000443036 613 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.37□□□□□ -1.87
ZIC3O60481 AC109927.2-201ENST00000506416 303 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.37□□□□□ -1.87
ZIC3O60481 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.37□□□□□ -1.87
ZIC3O60481 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.37□□□□□ -1.87
ZIC3O60481 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
ZIC3O60481 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.37□□□□□ -1.87
ZIC3O60481 AC008489.1-201ENST00000524271 483 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AP003034.1-201ENST00000534621 422 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
ZIC3O60481 AK6P1-201ENST00000540219 478 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.37□□□□□ -1.87
ZIC3O60481 HMGB1P33-201ENST00000563485 527 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.37□□□□□ -1.87
ZIC3O60481 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 MIR1254-2-201ENST00000579553 63 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 MIR4801-201ENST00000582704 82 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AC025946.2-201ENST00000603398 234 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 RBM11P1-201ENST00000604951 799 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.37□□□□□ -1.87
ZIC3O60481 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ZIC3O60481 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
ZIC3O60481 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZIC3O60481 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.37□□□□□ -1.87
ZIC3O60481 MAPK10-372ENST00000641954 3413 ntBASIC3.37□□□□□ -1.87
ZIC3O60481 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.36□□□□□ -1.87
ZIC3O60481 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 ZNF285B-201ENST00000561698 1767 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.36□□□□□ -1.87
ZIC3O60481 HSPE1P11-201ENST00000339579 310 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 Y_RNA.22-201ENST00000362492 102 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 SNORA23-201ENST00000365128 182 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RNU4-12P-201ENST00000365233 139 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RNU1-39P-201ENST00000383897 165 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RNU6-76P-201ENST00000384060 104 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RNU6-74P-201ENST00000384235 107 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RPL21P17-201ENST00000397467 475 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AL136372.1-201ENST00000403060 228 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RN7SKP27-201ENST00000410684 333 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.36□□□□□ -1.87
ZIC3O60481 MTATP6P18-201ENST00000417994 673 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AL035423.1-201ENST00000420331 213 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.36□□□□□ -1.87
ZIC3O60481 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 MTATP6P4-201ENST00000427725 675 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 GOT2P5-201ENST00000433995 546 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RPL26P6-201ENST00000440913 438 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 GAPDHP27-201ENST00000447427 1020 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RPL23AP20-201ENST00000447965 421 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AC140076.1-201ENST00000449897 361 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 MTND2P24-201ENST00000453434 806 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.36□□□□□ -1.87
ZIC3O60481 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZIC3O60481 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.36□□□□□ -1.87
ZIC3O60481 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
ZIC3O60481 KLHL2P1-201ENST00000508691 521 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 RNU2-10P-201ENST00000516375 211 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.36□□□□□ -1.87
ZIC3O60481 FAM60DP-201ENST00000524174 632 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZIC3O60481 AC109635.4-202ENST00000531666 412 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ZIC3O60481 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.36□□□□□ -1.87
ZIC3O60481 AC107016.1-201ENST00000550463 337 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.36□□□□□ -1.87
ZIC3O60481 AL360157.1-201ENST00000565962 87 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.36□□□□□ -1.87
ZIC3O60481 FAM60BP-201ENST00000578364 658 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.36□□□□□ -1.87
ZIC3O60481 AC245389.1-201ENST00000605141 529 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 BRDTP1-201ENST00000605735 677 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AP001330.5-201ENST00000607176 411 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 AC004067.1-201ENST00000608733 700 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.36□□□□□ -1.87
ZIC3O60481 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
ZIC3O60481 SNHG22-203ENST00000617833 660 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms