Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 HMGN2P38-201ENST00000423806 265 ntBASIC1.92□□□□□ -2.1
SSNA1O43805 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.92□□□□□ -2.1
SSNA1O43805 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.92□□□□□ -2.1
SSNA1O43805 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.92□□□□□ -2.1
SSNA1O43805 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.92□□□□□ -2.1
SSNA1O43805 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.92□□□□□ -2.1
SSNA1O43805 AC010468.3-201ENST00000508225 458 ntBASIC1.92□□□□□ -2.1
SSNA1O43805 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.92□□□□□ -2.1
SSNA1O43805 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.92□□□□□ -2.1
SSNA1O43805 AC010186.2-204ENST00000537668 439 ntBASIC1.92□□□□□ -2.1
SSNA1O43805 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.92□□□□□ -2.1
SSNA1O43805 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.92□□□□□ -2.1
SSNA1O43805 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.92□□□□□ -2.1
SSNA1O43805 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.92□□□□□ -2.1
SSNA1O43805 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.92□□□□□ -2.1
SSNA1O43805 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.92□□□□□ -2.1
SSNA1O43805 AP003973.1-201ENST00000604639 691 ntBASIC1.92□□□□□ -2.1
SSNA1O43805 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.92□□□□□ -2.1
SSNA1O43805 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SSNA1O43805 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SSNA1O43805 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.92□□□□□ -2.1
SSNA1O43805 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.92□□□□□ -2.1
SSNA1O43805 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSNA1O43805 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSNA1O43805 AC004520.1-201ENST00000608362 1413 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SSNA1O43805 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.91□□□□□ -2.1
SSNA1O43805 MTND5P1-201ENST00000445440 1375 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSNA1O43805 FTLP6-201ENST00000355274 422 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SSNA1O43805 RNU6-750P-201ENST00000390946 107 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 AL807761.1-201ENST00000417622 171 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSNA1O43805 ZNF863P-201ENST00000426746 417 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC007919.1-201ENST00000429380 217 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 HMGB1P9-201ENST00000429856 646 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.91□□□□□ -2.1
SSNA1O43805 RPS15AP28-201ENST00000435088 386 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 UBE2FP3-201ENST00000436366 524 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 EEF1B2P7-201ENST00000451177 676 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC128713.1-201ENST00000471495 306 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC068781.1-201ENST00000488231 618 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 BOLA3P3-201ENST00000505182 232 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 AC026801.2-201ENST00000515352 425 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC022447.1-201ENST00000515358 464 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 RNU6-751P-201ENST00000516382 101 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.91□□□□□ -2.1
SSNA1O43805 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.91□□□□□ -2.1
SSNA1O43805 AC008121.1-201ENST00000603244 268 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC024220.1-201ENST00000603675 484 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 ELOCP35-201ENST00000604289 336 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AL161729.4-201ENST00000604650 476 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.91□□□□□ -2.1
SSNA1O43805 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SSNA1O43805 AL449363.1-201ENST00000617815 186 ntBASIC1.91□□□□□ -2.1
SSNA1O43805 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSNA1O43805 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.91□□□□□ -2.1
SSNA1O43805 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
SSNA1O43805 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.9□□□□□ -2.11
SSNA1O43805 OR5T3-201ENST00000303059 1023 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 RNA5SP125-201ENST00000364843 120 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
SSNA1O43805 MIR27B-201ENST00000385129 97 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AL109755.1-201ENST00000401791 649 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 RN7SKP27-201ENST00000410684 333 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AL592310.1-201ENST00000414330 671 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 HMGB1P49-201ENST00000418882 569 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.9□□□□□ -2.11
SSNA1O43805 MTCYBP32-201ENST00000427945 1084 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.9□□□□□ -2.11
SSNA1O43805 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.9□□□□□ -2.11
SSNA1O43805 RPL26P9-201ENST00000457466 433 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC010460.2-201ENST00000509054 677 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC026436.1-201ENST00000510537 270 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 RN7SKP24-201ENST00000515888 284 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 SNORA31.6-201ENST00000516241 130 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC027309.2-201ENST00000520566 192 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC022784.5-201ENST00000522241 437 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC1.9□□□□□ -2.11
SSNA1O43805 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 MIR4789-201ENST00000577469 82 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.9□□□□□ -2.11
SSNA1O43805 AP002906.1-201ENST00000603405 233 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC120053.1-201ENST00000607706 736 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC098657.3-201ENST00000620434 263 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
SSNA1O43805 MIR6766-201ENST00000622641 72 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 AC068724.3-201ENST00000625906 87 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms