Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRPF3O43395 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF3O43395 MAPK10-372ENST00000641954 3413 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC008568.2-201ENST00000623862 2313 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 Y_RNA.41-201ENST00000362646 102 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 RNU1-64P-201ENST00000365443 163 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 SNORA48.7-201ENST00000391302 135 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PRPF3O43395 AC018630.2-202ENST00000422992 927 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 DNAJC19P4-201ENST00000440115 345 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF3O43395 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF3O43395 RN7SL93P-201ENST00000463035 293 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.32□□□□□ -1.72
PRPF3O43395 RPL21P129-201ENST00000491732 478 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC023194.1-201ENST00000493084 308 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 RPL37P25-201ENST00000507308 276 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF3O43395 RNU1-61P-201ENST00000516107 151 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 SCARNA15.2-201ENST00000516409 127 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.32□□□□□ -1.72
PRPF3O43395 FAM60DP-201ENST00000524174 632 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 ATP5F1P5-201ENST00000526403 760 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC135001.1-201ENST00000544546 283 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF3O43395 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.32□□□□□ -1.72
PRPF3O43395 ZNF519P2-201ENST00000557032 169 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC106785.1-201ENST00000565935 262 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AL021997.1-201ENST00000605757 193 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC103710.2-201ENST00000609912 942 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF3O43395 AC068792.1-201ENST00000621354 417 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC110801.1-201ENST00000623590 212 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF3O43395 AC099654.12-201ENST00000639868 649 ntBASIC4.32□□□□□ -1.72
PRPF3O43395 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF3O43395 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PRPF3O43395 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PRPF3O43395 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF3O43395 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 NCAPGP1-201ENST00000505112 1814 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 SNORD56.2-201ENST00000363242 71 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 RNU6-960P-201ENST00000364056 120 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 DEFB109C-201ENST00000382575 264 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 DEFB109B-201ENST00000382656 264 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 U8.11-201ENST00000384699 133 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 U8.12-201ENST00000384701 133 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 HSPE1P8-201ENST00000406997 288 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 RNU6-648P-201ENST00000410190 107 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 NDUFB4P7-201ENST00000423198 363 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 MED13P1-201ENST00000428342 171 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 TXNP1-201ENST00000441872 371 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF3O43395 MTND2P24-201ENST00000453434 806 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 U8.18-201ENST00000459285 133 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRPF3O43395 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF3O43395 AC108078.1-201ENST00000508073 725 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.31□□□□□ -1.72
PRPF3O43395 AC026402.1-201ENST00000513642 170 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 RNU6-410P-201ENST00000517006 107 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF3O43395 AC007991.1-201ENST00000522680 631 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 AP001804.3-201ENST00000525146 880 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.31□□□□□ -1.72
PRPF3O43395 MIR3167-201ENST00000579623 85 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 AC174048.1-201ENST00000603389 144 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 AL109618.2-201ENST00000605527 211 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 AC138649.3-201ENST00000622154 254 ntBASIC4.31□□□□□ -1.72
PRPF3O43395 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRPF3O43395 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.31□□□□□ -1.72
PRPF3O43395 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF3O43395 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF3O43395 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF3O43395 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 CR848007.1-201ENST00000442354 1699 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PRPF3O43395 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 RNU6-195P-201ENST00000411352 109 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF3O43395 BX295541.1-201ENST00000417774 250 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 CYP4F29P-201ENST00000420685 446 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 RAC1P6-201ENST00000423911 575 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 GPR143P-201ENST00000434155 205 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 NANOGNBP1-201ENST00000448444 480 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 MTCO3P20-201ENST00000454926 688 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 C1DP4-201ENST00000455429 424 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF3O43395 ARL2BPP6-201ENST00000512757 439 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 RNA5SP143-201ENST00000516936 115 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF3O43395 AC022616.3-201ENST00000523940 148 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms