Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MSH4O15457 Y_RNA.192-201ENST00000363977 102 ntBASIC2.84□□□□□ -1.95
MSH4O15457 RNU6-621P-201ENST00000364752 109 ntBASIC2.84□□□□□ -1.95
MSH4O15457 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.84□□□□□ -1.95
MSH4O15457 RPS4XP3-201ENST00000398541 413 ntBASIC2.84□□□□□ -1.95
MSH4O15457 RPS3AP24-201ENST00000407896 734 ntBASIC2.84□□□□□ -1.95
MSH4O15457 MIR1284-201ENST00000408337 120 ntBASIC2.84□□□□□ -1.95
MSH4O15457 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.84□□□□□ -1.95
MSH4O15457 CCDC58P2-201ENST00000417131 366 ntBASIC2.84□□□□□ -1.95
MSH4O15457 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.84□□□□□ -1.95
MSH4O15457 MTATP6P4-201ENST00000427725 675 ntBASIC2.84□□□□□ -1.95
MSH4O15457 SDR42E1P3-201ENST00000438345 502 ntBASIC2.84□□□□□ -1.95
MSH4O15457 COX6CP2-201ENST00000444980 225 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AL592447.1-201ENST00000447592 540 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC234775.1-201ENST00000454247 670 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AL359385.1-201ENST00000456509 365 ntBASIC2.84□□□□□ -1.95
MSH4O15457 snoU13.8-201ENST00000458890 104 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC126182.1-201ENST00000478134 357 ntBASIC2.84□□□□□ -1.95
MSH4O15457 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC134050.1-201ENST00000495088 933 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.84□□□□□ -1.95
MSH4O15457 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
MSH4O15457 RNU6-150P-201ENST00000516237 95 ntBASIC2.84□□□□□ -1.95
MSH4O15457 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.84□□□□□ -1.95
MSH4O15457 DEFB131D-201ENST00000526803 184 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MSH4O15457 CYCSP2-201ENST00000558168 301 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.84□□□□□ -1.95
MSH4O15457 AC034268.2-201ENST00000571784 482 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC009220.3-201ENST00000604318 586 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AL357080.1-201ENST00000617394 239 ntBASIC2.84□□□□□ -1.95
MSH4O15457 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MSH4O15457 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.84□□□□□ -1.95
MSH4O15457 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
MSH4O15457 AC090897.3-201ENST00000636973 1157 ntBASIC2.84□□□□□ -1.95
MSH4O15457 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
MSH4O15457 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.96
MSH4O15457 AC099786.3-201ENST00000565735 1410 ntBASIC2.84□□□□□ -1.96
MSH4O15457 API5P2-201ENST00000397055 1498 ntBASIC2.84□□□□□ -1.96
MSH4O15457 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MSH4O15457 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.83□□□□□ -1.96
MSH4O15457 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MSH4O15457 Y_RNA.234-201ENST00000364409 97 ntBASIC2.83□□□□□ -1.96
MSH4O15457 RNU6-343P-201ENST00000364709 104 ntBASIC2.83□□□□□ -1.96
MSH4O15457 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH4O15457 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 NANOGP5-201ENST00000424456 877 ntBASIC2.83□□□□□ -1.96
MSH4O15457 MTCO2P23-201ENST00000425216 680 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH4O15457 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 ST13P20-201ENST00000447996 1065 ntBASIC2.83□□□□□ -1.96
MSH4O15457 RPL21P134-201ENST00000453468 483 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC092155.2-201ENST00000454675 477 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH4O15457 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH4O15457 RPS26P21-201ENST00000475397 348 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH4O15457 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH4O15457 AC116353.3-201ENST00000511215 249 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC118465.1-201ENST00000513820 1271 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC022483.1-201ENST00000514020 567 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.83□□□□□ -1.96
MSH4O15457 RPL7P20-201ENST00000520308 745 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.83□□□□□ -1.96
MSH4O15457 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.83□□□□□ -1.96
MSH4O15457 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.83□□□□□ -1.96
MSH4O15457 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.83□□□□□ -1.96
MSH4O15457 MIR4298-201ENST00000584380 73 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC010620.2-201ENST00000600135 313 ntBASIC2.83□□□□□ -1.96
MSH4O15457 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 AL133445.2-201ENST00000611191 527 ntBASIC2.83□□□□□ -1.96
MSH4O15457 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
MSH4O15457 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 U4.3-201ENST00000621047 82 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC011330.2-201ENST00000621680 635 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AL445264.1-201ENST00000621719 171 ntBASIC2.83□□□□□ -1.96
MSH4O15457 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MSH4O15457 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
MSH4O15457 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH4O15457 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MSH4O15457 ZNF29P-201ENST00000225587 168 ntBASIC2.82□□□□□ -1.96
MSH4O15457 DEFB108F-201ENST00000344638 222 ntBASIC2.82□□□□□ -1.96
MSH4O15457 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MSH4O15457 SNORA67.4-201ENST00000384688 142 ntBASIC2.82□□□□□ -1.96
MSH4O15457 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MSH4O15457 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MSH4O15457 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 TMEM167AP1-201ENST00000423409 219 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH4O15457 RPL27AP8-201ENST00000424277 446 ntBASIC2.82□□□□□ -1.96
MSH4O15457 USP9YP24-201ENST00000434374 697 ntBASIC2.82□□□□□ -1.96
MSH4O15457 USP9YP17-201ENST00000444617 696 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC002381.1-201ENST00000447049 280 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH4O15457 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms