Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MTND4P1-201ENST00000457501 1466 ntBASIC2.3□□□□□ -2.04
CHD1O14646 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD1O14646 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
CHD1O14646 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD1O14646 RNU2-32P-201ENST00000411193 191 ntBASIC2.3□□□□□ -2.04
CHD1O14646 RPL30P3-201ENST00000424262 333 ntBASIC2.3□□□□□ -2.04
CHD1O14646 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD1O14646 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD1O14646 GLYCAM1-201ENST00000546596 285 ntBASIC2.3□□□□□ -2.04
CHD1O14646 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHD1O14646 AL109653.1-201ENST00000603091 248 ntBASIC2.3□□□□□ -2.04
CHD1O14646 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.29□□□□□ -2.04
CHD1O14646 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD1O14646 AP002345.1-201ENST00000456493 928 ntBASIC2.29□□□□□ -2.04
CHD1O14646 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
CHD1O14646 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.29□□□□□ -2.04
CHD1O14646 FABP5P5-201ENST00000515537 406 ntBASIC2.29□□□□□ -2.04
CHD1O14646 OR6C73P-201ENST00000546432 358 ntBASIC2.29□□□□□ -2.04
CHD1O14646 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD1O14646 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
CHD1O14646 AC025016.1-201ENST00000616746 682 ntBASIC2.29□□□□□ -2.04
CHD1O14646 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.29□□□□□ -2.04
CHD1O14646 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHD1O14646 RPL31P52-201ENST00000407532 367 ntBASIC2.28□□□□□ -2.04
CHD1O14646 MTND1P23-201ENST00000416931 372 ntBASIC2.28□□□□□ -2.04
CHD1O14646 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD1O14646 Z85994.2-201ENST00000434327 452 ntBASIC2.28□□□□□ -2.04
CHD1O14646 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD1O14646 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.28□□□□□ -2.04
CHD1O14646 HSFY3P-201ENST00000444242 1191 ntBASIC2.28□□□□□ -2.04
CHD1O14646 BMI1P1-201ENST00000445879 941 ntBASIC2.28□□□□□ -2.04
CHD1O14646 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHD1O14646 AC008837.2-201ENST00000513076 418 ntBASIC2.28□□□□□ -2.04
CHD1O14646 AC007115.1-201ENST00000546853 234 ntBASIC2.28□□□□□ -2.04
CHD1O14646 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
CHD1O14646 AC245036.5-201ENST00000596330 847 ntBASIC2.28□□□□□ -2.04
CHD1O14646 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.28□□□□□ -2.04
CHD1O14646 AC140725.3-201ENST00000616193 880 ntBASIC2.28□□□□□ -2.04
CHD1O14646 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHD1O14646 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CHD1O14646 DNAJC19P6-201ENST00000401853 280 ntBASIC2.28□□□□□ -2.05
CHD1O14646 RNU2-71P-201ENST00000411395 189 ntBASIC2.28□□□□□ -2.05
CHD1O14646 AC092447.6-201ENST00000414578 210 ntBASIC2.28□□□□□ -2.05
CHD1O14646 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.28□□□□□ -2.05
CHD1O14646 AC009901.1-201ENST00000506703 541 ntBASIC2.28□□□□□ -2.05
CHD1O14646 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.28□□□□□ -2.05
CHD1O14646 AP003122.6-201ENST00000623831 495 ntBASIC2.28□□□□□ -2.05
CHD1O14646 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
CHD1O14646 Y_RNA.178-201ENST00000363832 102 ntBASIC2.27□□□□□ -2.05
CHD1O14646 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CHD1O14646 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.27□□□□□ -2.05
CHD1O14646 HMGN1P8-201ENST00000463578 288 ntBASIC2.27□□□□□ -2.05
CHD1O14646 RBM43P1-201ENST00000476891 1081 ntBASIC2.27□□□□□ -2.05
CHD1O14646 AC004223.1-201ENST00000479840 271 ntBASIC2.27□□□□□ -2.05
CHD1O14646 RNU4-60P-201ENST00000517239 135 ntBASIC2.27□□□□□ -2.05
CHD1O14646 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.27□□□□□ -2.05
CHD1O14646 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CHD1O14646 RNA5SP489-201ENST00000410986 109 ntBASIC2.26□□□□□ -2.05
CHD1O14646 MTND4LP21-201ENST00000415303 295 ntBASIC2.26□□□□□ -2.05
CHD1O14646 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.26□□□□□ -2.05
CHD1O14646 MTCO2P32-201ENST00000514865 403 ntBASIC2.26□□□□□ -2.05
CHD1O14646 AC023813.2-201ENST00000564321 469 ntBASIC2.26□□□□□ -2.05
CHD1O14646 AC016727.2-201ENST00000603988 621 ntBASIC2.26□□□□□ -2.05
CHD1O14646 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHD1O14646 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD1O14646 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.25□□□□□ -2.05
CHD1O14646 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD1O14646 RPS26P56-201ENST00000444468 240 ntBASIC2.25□□□□□ -2.05
CHD1O14646 UBBP3-201ENST00000445497 241 ntBASIC2.25□□□□□ -2.05
CHD1O14646 RNA5SP436-201ENST00000516020 115 ntBASIC2.25□□□□□ -2.05
CHD1O14646 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.25□□□□□ -2.05
CHD1O14646 AC006329.2-201ENST00000611491 394 ntBASIC2.25□□□□□ -2.05
CHD1O14646 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD1O14646 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHD1O14646 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.25□□□□□ -2.05
CHD1O14646 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
CHD1O14646 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHD1O14646 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD1O14646 RPS12P24-201ENST00000412619 387 ntBASIC2.25□□□□□ -2.05
CHD1O14646 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.25□□□□□ -2.05
CHD1O14646 GTF2IP7-202ENST00000436677 309 ntBASIC2.25□□□□□ -2.05
CHD1O14646 AC005297.2-201ENST00000450430 606 ntBASIC2.25□□□□□ -2.05
CHD1O14646 HMGN2P16-201ENST00000456802 261 ntBASIC2.25□□□□□ -2.05
CHD1O14646 RPS3AP22-201ENST00000488297 769 ntBASIC2.25□□□□□ -2.05
CHD1O14646 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.25□□□□□ -2.05
CHD1O14646 AC104115.2-201ENST00000523026 687 ntBASIC2.25□□□□□ -2.05
CHD1O14646 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD1O14646 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.25□□□□□ -2.05
CHD1O14646 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.25□□□□□ -2.05
CHD1O14646 FAM106CP-201ENST00000582212 507 ntBASIC2.25□□□□□ -2.05
CHD1O14646 AC097468.3-201ENST00000607956 456 ntBASIC2.25□□□□□ -2.05
CHD1O14646 AL158801.5-201ENST00000623123 465 ntBASIC2.25□□□□□ -2.05
CHD1O14646 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD1O14646 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.25□□□□□ -2.05
CHD1O14646 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD1O14646 CUL4AP1-201ENST00000514750 1863 ntBASIC2.24□□□□□ -2.05
CHD1O14646 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.24□□□□□ -2.05
CHD1O14646 MIR1304-201ENST00000408243 91 ntBASIC2.24□□□□□ -2.05
CHD1O14646 AC234781.2-201ENST00000426370 994 ntBASIC2.24□□□□□ -2.05
CHD1O14646 MTCYBP12-201ENST00000440559 1134 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms