Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-468P-201ENST00000384003 109 ntBASIC3.6□□□□□ -1.83
CUX2O14529 MTCO2P31-201ENST00000402702 684 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC244098.2-201ENST00000422068 99 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 AP000949.1-201ENST00000438328 629 ntBASIC3.6□□□□□ -1.83
CUX2O14529 RNU7-95P-201ENST00000459222 64 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.6□□□□□ -1.83
CUX2O14529 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
CUX2O14529 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.6□□□□□ -1.83
CUX2O14529 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 MTCO1P40-201ENST00000574371 625 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.6□□□□□ -1.83
CUX2O14529 AL627309.6-201ENST00000606857 840 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC124016.2-201ENST00000610058 665 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC006249.1-201ENST00000621223 471 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC080188.3-201ENST00000624842 748 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC138649.5-201ENST00000637456 137 ntBASIC3.6□□□□□ -1.83
CUX2O14529 BX649567.1-201ENST00000642071 1134 ntBASIC3.6□□□□□ -1.83
CUX2O14529 AC008568.2-201ENST00000623862 2313 ntBASIC3.59□□□□□ -1.83
CUX2O14529 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CUX2O14529 MIR649-201ENST00000384843 97 ntBASIC3.59□□□□□ -1.84
CUX2O14529 RPL22P22-201ENST00000395439 379 ntBASIC3.59□□□□□ -1.84
CUX2O14529 AL121972.1-201ENST00000402023 252 ntBASIC3.59□□□□□ -1.84
CUX2O14529 SFR1P2-201ENST00000421841 730 ntBASIC3.59□□□□□ -1.84
CUX2O14529 NDUFA5P7-201ENST00000452914 242 ntBASIC3.59□□□□□ -1.84
CUX2O14529 AC092155.2-201ENST00000454675 477 ntBASIC3.59□□□□□ -1.84
CUX2O14529 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.59□□□□□ -1.84
CUX2O14529 RNA5SP220-201ENST00000516298 104 ntBASIC3.59□□□□□ -1.84
CUX2O14529 AC004486.1-201ENST00000546846 233 ntBASIC3.59□□□□□ -1.84
CUX2O14529 LSM6P2-201ENST00000552208 177 ntBASIC3.59□□□□□ -1.84
CUX2O14529 AC090616.5-202ENST00000582111 297 ntBASIC3.59□□□□□ -1.84
CUX2O14529 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.59□□□□□ -1.84
CUX2O14529 AL355812.1-201ENST00000603215 216 ntBASIC3.59□□□□□ -1.84
CUX2O14529 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.59□□□□□ -1.84
CUX2O14529 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.59□□□□□ -1.84
CUX2O14529 VN1R7P-201ENST00000619242 903 ntBASIC3.59□□□□□ -1.84
CUX2O14529 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
CUX2O14529 AC093536.2-201ENST00000565257 1406 ntBASIC3.58□□□□□ -1.84
CUX2O14529 SNORA40.18-201ENST00000391200 128 ntBASIC3.58□□□□□ -1.84
CUX2O14529 AC069282.1-201ENST00000411911 526 ntBASIC3.58□□□□□ -1.84
CUX2O14529 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.58□□□□□ -1.84
CUX2O14529 MTCYBP24-201ENST00000420387 1106 ntBASIC3.58□□□□□ -1.84
CUX2O14529 AC114973.1-201ENST00000429057 632 ntBASIC3.58□□□□□ -1.84
CUX2O14529 MTCYBP15-201ENST00000433123 1127 ntBASIC3.58□□□□□ -1.84
CUX2O14529 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.58□□□□□ -1.84
CUX2O14529 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.58□□□□□ -1.84
CUX2O14529 FABP5P13-201ENST00000452144 328 ntBASIC3.58□□□□□ -1.84
CUX2O14529 AC048346.1-201ENST00000510247 144 ntBASIC3.58□□□□□ -1.84
CUX2O14529 MTCO3P27-201ENST00000514397 196 ntBASIC3.58□□□□□ -1.84
CUX2O14529 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.58□□□□□ -1.84
CUX2O14529 HIGD1AP10-201ENST00000527837 282 ntBASIC3.58□□□□□ -1.84
CUX2O14529 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.58□□□□□ -1.84
CUX2O14529 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.58□□□□□ -1.84
CUX2O14529 AC060766.3-201ENST00000591442 263 ntBASIC3.58□□□□□ -1.84
CUX2O14529 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.58□□□□□ -1.84
CUX2O14529 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.58□□□□□ -1.84
CUX2O14529 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CUX2O14529 AL157700.1-201ENST00000561973 1432 ntBASIC3.57□□□□□ -1.84
CUX2O14529 API5P2-201ENST00000397055 1498 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AL121978.1-201ENST00000402778 359 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AC092638.1-201ENST00000411966 1275 ntBASIC3.57□□□□□ -1.84
CUX2O14529 RPS3AP9-201ENST00000417027 792 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AC009237.2-201ENST00000421358 284 ntBASIC3.57□□□□□ -1.84
CUX2O14529 YWHAZP7-201ENST00000436906 631 ntBASIC3.57□□□□□ -1.84
CUX2O14529 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.57□□□□□ -1.84
CUX2O14529 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.57□□□□□ -1.84
CUX2O14529 SEPT14P24-201ENST00000447236 180 ntBASIC3.57□□□□□ -1.84
CUX2O14529 ATP5J2P3-201ENST00000451550 258 ntBASIC3.57□□□□□ -1.84
CUX2O14529 NF1P3-201ENST00000457709 450 ntBASIC3.57□□□□□ -1.84
CUX2O14529 MTCO1P30-201ENST00000515244 580 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.57□□□□□ -1.84
CUX2O14529 ARL2BPP2-201ENST00000550907 489 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.57□□□□□ -1.84
CUX2O14529 AC107954.1-201ENST00000565906 727 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AC023825.1-201ENST00000566704 1030 ntBASIC3.57□□□□□ -1.84
CUX2O14529 GAS5-AS1-201ENST00000602767 694 ntBASIC3.57□□□□□ -1.84
CUX2O14529 AC002487.1-201ENST00000604565 994 ntBASIC3.57□□□□□ -1.84
CUX2O14529 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.57□□□□□ -1.84
CUX2O14529 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CUX2O14529 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CUX2O14529 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.57□□□□□ -1.84
CUX2O14529 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CUX2O14529 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.56□□□□□ -1.84
CUX2O14529 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CUX2O14529 RNU5B-4P-201ENST00000363508 111 ntBASIC3.56□□□□□ -1.84
CUX2O14529 AL354719.1-201ENST00000406535 843 ntBASIC3.56□□□□□ -1.84
CUX2O14529 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.56□□□□□ -1.84
CUX2O14529 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.56□□□□□ -1.84
CUX2O14529 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CUX2O14529 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.56□□□□□ -1.84
CUX2O14529 NCOR1P1-202ENST00000486162 291 ntBASIC3.56□□□□□ -1.84
CUX2O14529 RPL23AP63-201ENST00000498752 471 ntBASIC3.56□□□□□ -1.84
CUX2O14529 TMEM248P1-201ENST00000510579 951 ntBASIC3.56□□□□□ -1.84
CUX2O14529 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.56□□□□□ -1.84
CUX2O14529 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.56□□□□□ -1.84
CUX2O14529 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms