Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC025281.1-201ENST00000567026 265 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC080013.4-201ENST00000607624 649 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC120053.1-201ENST00000607706 736 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC084824.5-201ENST00000612009 413 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 AC068880.4-201ENST00000623082 495 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1AO00322 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.2□□□□□ -2.06
UPK1AO00322 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
UPK1AO00322 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
UPK1AO00322 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
UPK1AO00322 RNU5A-1-201ENST00000362698 116 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 RNU6-236P-201ENST00000363886 106 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 RNU6-707P-201ENST00000364647 95 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 RNU6-198P-201ENST00000384258 104 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 Y_RNA.510-201ENST00000384511 114 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 RNU2-25P-201ENST00000411041 191 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AL356320.2-201ENST00000417263 507 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AL590383.1-201ENST00000428602 75 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.2□□□□□ -2.06
UPK1AO00322 AL590233.1-201ENST00000430017 456 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.2□□□□□ -2.06
UPK1AO00322 RPS15AP7-201ENST00000439294 405 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.2□□□□□ -2.06
UPK1AO00322 AL513328.1-201ENST00000446460 224 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AC017099.1-201ENST00000448261 1028 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 snoU13.28-201ENST00000459235 104 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 GZMAP1-201ENST00000503054 631 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AC234781.5-201ENST00000508429 271 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 MTCO3P27-201ENST00000514397 196 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 RNU6-798P-201ENST00000516912 103 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.2□□□□□ -2.06
UPK1AO00322 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.2□□□□□ -2.06
UPK1AO00322 AC021269.2-201ENST00000532318 330 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.2□□□□□ -2.06
UPK1AO00322 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.2□□□□□ -2.06
UPK1AO00322 ISCA1P3-201ENST00000577104 373 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AC020895.1-201ENST00000595362 272 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.2□□□□□ -2.06
UPK1AO00322 AC099785.1-201ENST00000605697 437 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AC005332.6-201ENST00000613178 446 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
UPK1AO00322 AC243829.7-201ENST00000633081 225 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.2□□□□□ -2.06
UPK1AO00322 MAPK10-266ENST00000641066 6555 ntBASIC2.2□□□□□ -2.06
UPK1AO00322 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.2□□□□□ -2.06
UPK1AO00322 AC107982.1-201ENST00000507171 1300 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
UPK1AO00322 AC093536.2-201ENST00000565257 1406 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UPK1AO00322 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UPK1AO00322 SNORD65.1-201ENST00000390889 71 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 RPS3AP24-201ENST00000407896 734 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 RN7SKP140-201ENST00000411196 284 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 LUZP4P1-201ENST00000415420 344 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 NANOGP5-201ENST00000424456 877 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.19□□□□□ -2.06
UPK1AO00322 AL356867.1-201ENST00000429623 299 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 ARPC3P1-201ENST00000437218 533 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.19□□□□□ -2.06
UPK1AO00322 AL353691.1-201ENST00000451332 387 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 MTND4LP3-201ENST00000468320 276 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 LINC00888-204ENST00000487386 421 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.19□□□□□ -2.06
UPK1AO00322 AC109464.2-201ENST00000510242 943 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 TTC39CP1-201ENST00000512513 755 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UPK1AO00322 RNU1-103P-201ENST00000516502 125 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.19□□□□□ -2.06
UPK1AO00322 NBEAP1-201ENST00000554452 979 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 HMGB1P14-201ENST00000557424 591 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.19□□□□□ -2.06
UPK1AO00322 ACTR3BP3-201ENST00000565577 979 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC008739.2-201ENST00000597006 317 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC006023.1-201ENST00000603944 259 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC004853.1-201ENST00000604902 698 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.19□□□□□ -2.06
UPK1AO00322 AC034102.8-201ENST00000615146 484 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
UPK1AO00322 AC084824.4-201ENST00000620106 731 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC068880.5-201ENST00000624331 290 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC110079.1-202ENST00000635213 138 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 PABPC1P9-201ENST00000426076 1612 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 AC097714.1-201ENST00000511272 1647 ntBASIC2.19□□□□□ -2.06
UPK1AO00322 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
UPK1AO00322 CKAP2P1-201ENST00000555477 2049 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC005832.2-201ENST00000538921 1430 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UPK1AO00322 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms