Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.68□□□□□ -1.66
RFXAPO00287 AL354984.3-201ENST00000604803 325 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 AC004696.1-201ENST00000614345 607 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 AL355365.1-201ENST00000616480 294 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 AC106871.1-201ENST00000568324 3102 ntBASIC4.68□□□□□ -1.66
RFXAPO00287 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RFXAPO00287 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RFXAPO00287 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.68□□□□□ -1.66
RFXAPO00287 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFXAPO00287 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.68□□□□□ -1.66
RFXAPO00287 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
RFXAPO00287 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
RFXAPO00287 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.67□□□□□ -1.66
RFXAPO00287 AL445487.1-201ENST00000415694 1580 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RFXAPO00287 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.67□□□□□ -1.66
RFXAPO00287 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 Y_RNA.404-201ENST00000383978 102 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 SNORA75B-201ENST00000384053 137 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 RNU6-1207P-201ENST00000384343 107 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 MIR3065-201ENST00000390137 79 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 RPL21P67-201ENST00000402896 478 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 RN7SKP235-201ENST00000410662 305 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.67□□□□□ -1.66
RFXAPO00287 AC022022.1-201ENST00000430304 178 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.67□□□□□ -1.66
RFXAPO00287 PPIAP13-201ENST00000434706 478 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.67□□□□□ -1.66
RFXAPO00287 AC004938.1-201ENST00000438468 308 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AF228730.2-201ENST00000438784 848 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AC114495.1-201ENST00000441274 436 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.67□□□□□ -1.66
RFXAPO00287 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.67□□□□□ -1.66
RFXAPO00287 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.67□□□□□ -1.66
RFXAPO00287 MIR3200-201ENST00000580767 85 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AC060771.1-201ENST00000582031 164 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.67□□□□□ -1.66
RFXAPO00287 AC079587.1-201ENST00000603846 277 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 AC100812.1-201ENST00000607622 580 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 PLCE1P1-201ENST00000622094 305 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.67□□□□□ -1.66
RFXAPO00287 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.67□□□□□ -1.66
RFXAPO00287 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RFXAPO00287 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.67□□□□□ -1.66
RFXAPO00287 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFXAPO00287 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFXAPO00287 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.66□□□□□ -1.66
RFXAPO00287 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFXAPO00287 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.66□□□□□ -1.66
RFXAPO00287 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFXAPO00287 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.66□□□□□ -1.66
RFXAPO00287 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFXAPO00287 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.66□□□□□ -1.66
RFXAPO00287 HSPE1P11-201ENST00000339579 310 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL161781.1-201ENST00000354277 403 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 Y_RNA.80-201ENST00000362996 102 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.66□□□□□ -1.66
RFXAPO00287 Y_RNA.485-201ENST00000384395 102 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 SNORA19-201ENST00000384737 128 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 RNU6-1109P-201ENST00000391187 107 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 OR6C66P-201ENST00000414917 930 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 AL139396.1-201ENST00000421137 167 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.66□□□□□ -1.66
RFXAPO00287 RPL36P19-201ENST00000430744 301 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.66□□□□□ -1.66
RFXAPO00287 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFXAPO00287 RPL21P2-201ENST00000440049 481 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL031584.1-201ENST00000447169 754 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 RNU7-182P-201ENST00000459009 62 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AC004801.2-202ENST00000463559 283 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 RPL21P93-201ENST00000480465 489 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 RNU6-488P-201ENST00000515918 99 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 RNA5SP503-201ENST00000517047 117 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 RNU6-699P-201ENST00000517081 110 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 AC022882.1-201ENST00000532142 501 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 RPL21P12-201ENST00000559810 515 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.66□□□□□ -1.66
RFXAPO00287 MIR5685-201ENST00000579080 79 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.66□□□□□ -1.66
RFXAPO00287 AC023043.2-201ENST00000589678 1026 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AC092747.3-201ENST00000603769 301 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 ATP1B3P1-201ENST00000605365 821 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.66□□□□□ -1.66
RFXAPO00287 AC011890.2-201ENST00000613393 294 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL121772.2-201ENST00000614331 297 ntBASIC4.66□□□□□ -1.66
RFXAPO00287 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.66□□□□□ -1.66
RFXAPO00287 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms