Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC188H7C350 MTND4LP18-201ENST00000526864 291 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.25□□□□□ -1.89
CCDC188H7C350 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC188H7C350 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC188H7C350 AC008015.1-201ENST00000555505 465 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC188H7C350 MTCO3P24-201ENST00000572729 782 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC188H7C350 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AC103710.1-201ENST00000610003 901 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AL121772.2-201ENST00000614331 297 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 SDR42E1P2-201ENST00000614861 481 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC188H7C350 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
CCDC188H7C350 AC079416.3-201ENST00000624479 549 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 AC092192.1-201ENST00000633154 1018 ntBASIC3.25□□□□□ -1.89
CCDC188H7C350 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC188H7C350 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC188H7C350 DYNLT3P1-201ENST00000378574 347 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 RNU6-809P-201ENST00000384461 107 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 RNU6-278P-201ENST00000390945 109 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 MTND4P20-201ENST00000424125 869 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC188H7C350 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AL390023.1-201ENST00000428836 262 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC007919.1-201ENST00000429380 217 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AL512844.2-201ENST00000433990 593 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 RPL22P17-201ENST00000438729 315 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 ELOCP30-201ENST00000447108 299 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC140076.1-201ENST00000449897 361 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AL031183.1-201ENST00000457667 207 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 RNU7-59P-201ENST00000459101 61 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 RPS20P20-201ENST00000460498 340 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AP004217.1-201ENST00000480579 346 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 RN7SL633P-201ENST00000488974 297 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC188H7C350 RNU6-1129P-201ENST00000515964 104 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 CASP1P1-201ENST00000526345 212 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AP000857.1-201ENST00000532151 543 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC188H7C350 PCMTD1P2-201ENST00000565017 355 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC005951.2-201ENST00000576282 495 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 OR10AB1P-201ENST00000609613 938 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 AC010133.1-201ENST00000615809 842 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC188H7C350 CCT4P2-201ENST00000233836 1548 ntBASIC3.24□□□□□ -1.89
CCDC188H7C350 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC188H7C350 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC188H7C350 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC188H7C350 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC188H7C350 RNY4P24-201ENST00000362735 96 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 RNU6-501P-201ENST00000364072 100 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 Y_RNA.560-201ENST00000384689 102 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 CCNG1P1-201ENST00000406783 885 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 RPL21P24-201ENST00000413752 448 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC069157.1-201ENST00000421749 137 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC188H7C350 GOT2P5-201ENST00000433995 546 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 HSPD1P21-201ENST00000436541 245 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC188H7C350 MTCO1P42-201ENST00000457379 726 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 RPL7P15-201ENST00000461190 712 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC068587.2-201ENST00000478386 781 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 RPL23AP41-201ENST00000484754 458 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AF131216.2-201ENST00000512316 564 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 TTC39CP1-201ENST00000512513 755 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC188H7C350 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 OR5B10P-201ENST00000532869 642 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC188H7C350 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC188H7C350 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC188H7C350 RPL21P12-201ENST00000559810 515 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC188H7C350 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CCDC188H7C350 MIR4307-201ENST00000582802 84 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC090616.2-202ENST00000584248 222 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AP001981.2-201ENST00000603241 418 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 BCRP9-201ENST00000605312 388 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC004223.4-201ENST00000612426 332 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC090970.3-201ENST00000612566 866 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC093838.1-201ENST00000613014 469 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AC039056.2-201ENST00000622261 511 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms