Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
SMKR1H3BMG3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.15□□□□□ -2.06
SMKR1H3BMG3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.15□□□□□ -2.06
SMKR1H3BMG3 RNA5SP124-201ENST00000362739 110 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 SNORD15B-201ENST00000384714 146 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MIR218-2-201ENST00000385006 110 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 RNU6-750P-201ENST00000390946 107 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 RNU6-1176P-201ENST00000390955 107 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 RN7SKP266-201ENST00000410232 287 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 USP9YP26-201ENST00000421008 661 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 HSPD1P21-201ENST00000436541 245 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 SNRPEP9-201ENST00000436794 238 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC016696.1-201ENST00000446949 318 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 FCF1P6-201ENST00000456841 595 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 snoU13.22-201ENST00000459428 104 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 RPL7P18-201ENST00000478965 734 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC103975.1-201ENST00000482506 483 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC134050.1-201ENST00000495088 933 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 EIF4EP3-201ENST00000498782 656 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MTND5P13-201ENST00000513046 1079 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 ELOCP31-201ENST00000540463 467 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC107016.2-201ENST00000547968 190 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC007224.1-201ENST00000564410 144 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MIR4509-3-201ENST00000578671 94 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MIR4509-2-201ENST00000583920 94 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC112220.3-201ENST00000605502 502 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC013562.2-201ENST00000611632 603 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AL359198.2-201ENST00000611836 194 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MIR4509-1-201ENST00000618224 94 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AL445984.1-201ENST00000637834 659 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
SMKR1H3BMG3 AP000776.1-201ENST00000530032 1663 ntBASIC2.15□□□□□ -2.07
SMKR1H3BMG3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AL137003.2-201ENST00000606924 2538 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RNU1-35P-201ENST00000362782 153 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 MIR620-201ENST00000385232 95 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 TAS2R15P-201ENST00000390674 928 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RN7SKP159-201ENST00000410657 292 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RNU2-49P-201ENST00000410666 184 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RPL21P24-201ENST00000413752 448 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 ELOCP14-201ENST00000428070 331 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 TXNL1P1-201ENST00000429528 554 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 ELOCP7-201ENST00000439968 331 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC020550.1-201ENST00000447385 163 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 PRDX3P3-201ENST00000447765 522 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 GSTA11P-201ENST00000452866 669 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC008155.2-201ENST00000464337 397 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RPL23AP11-201ENST00000475260 469 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 OR2A20P-203ENST00000498397 1268 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC093809.1-201ENST00000509155 340 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC093281.2-201ENST00000510153 597 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC008716.1-201ENST00000511084 513 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RNA5SP471-201ENST00000516971 106 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 CDH12P4-201ENST00000517835 295 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 CDH12P3-201ENST00000517935 295 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 CDH12P1-201ENST00000518435 295 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms