Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC097262.1-201ENST00000452559 548 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL359385.1-201ENST00000456509 365 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MTND4LP22-201ENST00000508209 276 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 APOOP4-201ENST00000513530 597 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC025881.1-201ENST00000518851 512 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 OSBPL9P5-201ENST00000542581 171 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 OR4H12P-201ENST00000556269 907 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC005951.2-201ENST00000576282 495 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AF038458.1-201ENST00000588406 262 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL606834.2-201ENST00000602954 668 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AP001981.2-201ENST00000603241 418 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 Z83843.1-201ENST00000604070 3685 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC005000.2-201ENST00000605468 310 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC004908.2-201ENST00000609090 574 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL355472.4-201ENST00000610233 626 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC093838.1-201ENST00000613014 469 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC027807.2-201ENST00000616099 408 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL138713.1-201ENST00000624026 2130 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 MIR4275-201ENST00000636486 87 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AC093010.3-201ENST00000570269 15214 ntBASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
NPIPA3F8WFD2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 RNY4P24-201ENST00000362735 96 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 RNA5SP197-201ENST00000363357 119 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 MIR514A1-201ENST00000385133 98 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 SNORA48.2-201ENST00000390926 124 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 RPS20P2-201ENST00000402520 389 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 FAT1P1-201ENST00000406588 507 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 MIR1290-201ENST00000408735 78 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC126124.2-201ENST00000413542 321 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 Z99755.1-201ENST00000414048 380 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 TMEM167AP1-201ENST00000423409 219 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC092573.2-201ENST00000434546 243 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 SNRPEP4-201ENST00000435815 279 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 RPL22P17-201ENST00000438729 315 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC118469.1-201ENST00000442943 488 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC008264.1-201ENST00000447612 367 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 SETP11-201ENST00000473027 690 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC106038.2-201ENST00000520706 568 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AP000857.1-201ENST00000532151 543 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AL133153.1-201ENST00000557756 303 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC005951.1-201ENST00000576706 485 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 MIR4474-201ENST00000579189 78 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC105129.3-201ENST00000605455 485 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC002076.2-201ENST00000617362 122 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA3F8WFD2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 CUL1P1-201ENST00000509510 2425 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RNU6-223P-201ENST00000362830 107 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RNU6-533P-201ENST00000384144 107 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 TXNP7-201ENST00000406296 293 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RN7SKP111-201ENST00000410349 271 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RPL30P2-201ENST00000414021 291 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 RPS15AP6-201ENST00000420703 385 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 Z99497.1-201ENST00000421282 135 ntBASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA3F8WFD2 MED14P1-201ENST00000430517 648 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms