Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC023347.2-201ENST00000433994 462 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC015922.2-201ENST00000435593 184 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AL590762.3-201ENST00000436372 640 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 ARPC3P1-201ENST00000437218 533 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AL445687.1-201ENST00000439946 251 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 RPL5P13-201ENST00000462840 709 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC015908.1-201ENST00000478739 476 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 LARP7P4-201ENST00000481075 878 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 TRAV28-201ENST00000557548 323 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 OR1M4P-201ENST00000589199 287 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 VN1R81P-201ENST00000602085 372 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AL136363.1-201ENST00000605349 337 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 RNU4-42P-201ENST00000364738 142 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 MIR320B1-201ENST00000390209 79 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 AC016769.3-201ENST00000396562 315 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 RPS7P9-201ENST00000414704 586 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 AC244033.1-201ENST00000426826 870 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 PSPHP1-201ENST00000450062 261 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 RN7SKP210-201ENST00000459176 261 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 AC020699.1-201ENST00000505161 445 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 AC108120.2-201ENST00000512973 294 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 COX6B1P6-201ENST00000522347 255 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 CBX3P2-202ENST00000583365 535 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 MIR6076-201ENST00000617521 113 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 AC006963.1-201ENST00000624003 1052 ntBASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.13□□□□□ -2.23
CPSF4LA6NMK7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 RNU6-661P-201ENST00000362409 107 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AL590084.1-201ENST00000407885 387 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 RNU2-41P-201ENST00000410991 178 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 MTND5P25-201ENST00000430499 799 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 HMGB1P31-201ENST00000437242 427 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 RNA5SP310-201ENST00000459084 116 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC097493.1-201ENST00000463958 372 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AL121769.1-201ENST00000469473 401 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 RPL30P14-201ENST00000482744 348 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 OR5BM1P-201ENST00000512021 366 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC024619.4-201ENST00000580924 316 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC135178.6-201ENST00000605314 398 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 SNORD14A-201ENST00000606526 91 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC011330.2-201ENST00000621680 635 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC091812.1-201ENST00000432235 1948 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 AC009812.4-201ENST00000569134 1805 ntBASIC1.12□□□□□ -2.23
CPSF4LA6NMK7 RNU6-1159P-201ENST00000362933 107 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 RNU4-74P-201ENST00000411280 161 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 HMGB1P49-201ENST00000418882 569 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 OR51AB1P-201ENST00000429046 620 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 UBE2V1P13-201ENST00000436983 439 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AC093155.1-201ENST00000440164 826 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AC009296.1-201ENST00000443146 155 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 SETP11-201ENST00000473027 690 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AP004247.1-201ENST00000531556 1289 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 CYCSP26-201ENST00000534107 320 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 BNIP3P7-201ENST00000605641 516 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AC009570.1-201ENST00000609599 745 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AL391834.1-201ENST00000609609 560 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 AL138880.2-201ENST00000616214 239 ntBASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.11□□□□□ -2.23
CPSF4LA6NMK7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 Z85994.2-201ENST00000434327 452 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms