Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 SNORA23-201ENST00000365128 182 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 RNU6-805P-201ENST00000365643 106 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 DEFB109C-201ENST00000382575 264 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 DEFB109B-201ENST00000382656 264 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 RNU6-348P-201ENST00000384386 107 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 DEFB108C-201ENST00000400154 252 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 RNU6-248P-201ENST00000410720 107 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 RAB9AP3-201ENST00000412737 573 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC073063.1-201ENST00000434352 607 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 AL162389.1-201ENST00000449233 177 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 RAB9AP1-201ENST00000449393 573 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC078785.3-201ENST00000476607 425 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC106707.2-201ENST00000484182 374 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC114967.1-201ENST00000504890 259 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 MTND4LP31-201ENST00000514859 294 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 MTCO2P32-201ENST00000514865 403 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 RNU2-46P-201ENST00000517038 113 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC015917.1-201ENST00000579654 510 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC103987.3-201ENST00000582071 292 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 MIR4697-201ENST00000582977 78 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC090970.3-201ENST00000612566 866 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC004696.1-201ENST00000614345 607 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 AC073476.4-201ENST00000628409 72 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 SRP72P2-201ENST00000344851 1979 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 RNU6-50P-201ENST00000362356 103 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 SNORA73.2-201ENST00000364946 201 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 SNORA57.1-201ENST00000391227 145 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AL109755.1-201ENST00000401791 649 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 RNA5SP293-201ENST00000410527 113 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 CDK8P2-201ENST00000415020 547 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 MORF4L1P6-201ENST00000418771 268 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AL662791.1-201ENST00000441992 928 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC125238.1-201ENST00000448842 249 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 CFTRP1-201ENST00000456646 183 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 HMGN2P16-201ENST00000456802 261 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 snoU109.1-201ENST00000459339 135 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 RAP1BP2-201ENST00000478270 544 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 ERHP1-201ENST00000523006 310 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 IGKV2D-19-201ENST00000523346 262 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 DEFB108A-201ENST00000530110 222 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AP002963.1-201ENST00000530590 184 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC005832.2-201ENST00000538921 1430 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC135279.1-201ENST00000543493 504 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC137800.2-201ENST00000574375 120 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 KC877982.1-201ENST00000602313 470 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC106900.2-201ENST00000604994 317 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC091304.9-201ENST00000612091 226 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 uc_338.1-201ENST00000612113 180 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AL356321.1-201ENST00000621360 228 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AC092656.1-203ENST00000624134 423 ntBASIC3.57□□□□□ -1.84
LRRC53A6NM62 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LRRC53A6NM62 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC53A6NM62 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC53A6NM62 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRRC53A6NM62 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.56□□□□□ -1.84
LRRC53A6NM62 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRRC53A6NM62 RNA5SP119-201ENST00000362715 117 ntBASIC3.56□□□□□ -1.84
LRRC53A6NM62 RNA5SP383-201ENST00000362934 120 ntBASIC3.56□□□□□ -1.84
LRRC53A6NM62 U8.3-201ENST00000363321 132 ntBASIC3.56□□□□□ -1.84
LRRC53A6NM62 RNY3P13-201ENST00000365542 102 ntBASIC3.56□□□□□ -1.84
LRRC53A6NM62 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
LRRC53A6NM62 RNU1-39P-201ENST00000383897 165 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms