Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.92□□□□□ -2.1
RGPD3A6NKT7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.92□□□□□ -2.1
RGPD3A6NKT7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RGPD3A6NKT7 MIR6788-201ENST00000618842 66 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AC007275.1-201ENST00000621243 671 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AL158801.5-201ENST00000623123 465 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AL133216.2-202ENST00000634512 349 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.92□□□□□ -2.1
RGPD3A6NKT7 AC006026.1-201ENST00000444025 1803 ntBASIC1.92□□□□□ -2.1
RGPD3A6NKT7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 RNU1-22P-201ENST00000363334 158 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 CD24P4-201ENST00000382840 243 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 MIR598-201ENST00000384868 97 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 NF1P3-201ENST00000457709 450 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AC010301.1-201ENST00000473936 355 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AC008083.4-201ENST00000615076 444 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AP001350.1-201ENST00000601906 1524 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 AC068700.1-201ENST00000565862 3754 ntBASIC1.91□□□□□ -2.1
RGPD3A6NKT7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RGPD3A6NKT7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
RGPD3A6NKT7 ZNF734P-201ENST00000419494 1534 ntBASIC1.9□□□□□ -2.1
RGPD3A6NKT7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.9□□□□□ -2.1
RGPD3A6NKT7 MTND4LP21-201ENST00000415303 295 ntBASIC1.9□□□□□ -2.1
RGPD3A6NKT7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.9□□□□□ -2.1
RGPD3A6NKT7 snoU109.4-201ENST00000458953 143 ntBASIC1.9□□□□□ -2.1
RGPD3A6NKT7 AC245128.3-201ENST00000594721 748 ntBASIC1.9□□□□□ -2.1
RGPD3A6NKT7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.1
RGPD3A6NKT7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.9□□□□□ -2.11
RGPD3A6NKT7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RGPD3A6NKT7 SNORA14A-201ENST00000364773 135 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RGPD3A6NKT7 RNU6-1077P-201ENST00000410506 102 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 RNU2-25P-201ENST00000411041 191 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AL513185.2-201ENST00000425543 193 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 MTATP6P4-201ENST00000427725 675 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 SNRPEP4-201ENST00000435815 279 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AL035407.2-201ENST00000454090 378 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AC109446.2-201ENST00000567872 497 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 MIR7973-1-201ENST00000614683 76 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 DUXAP9-208ENST00000622815 614 ntBASIC1.9□□□□□ -2.11
RGPD3A6NKT7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AC114973.1-201ENST00000429057 632 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 ARL5AP2-201ENST00000444698 533 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AP001804.3-201ENST00000525146 880 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AL592494.3-201ENST00000609485 464 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AC008121.3-201ENST00000618726 433 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AP000676.4-201ENST00000624659 623 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AC138915.1-201ENST00000565427 1685 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 PABPC1P7-201ENST00000413177 1513 ntBASIC1.89□□□□□ -2.11
RGPD3A6NKT7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
RGPD3A6NKT7 AC135776.4-201ENST00000624300 1904 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 RNU4-51P-201ENST00000364206 140 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AC073264.1-201ENST00000411508 416 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 POLR2J4-204ENST00000418424 324 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AL354695.1-201ENST00000427935 228 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.88□□□□□ -2.11
RGPD3A6NKT7 COX6CP14-201ENST00000469580 174 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.88□□□□□ -2.11
RGPD3A6NKT7 RPPH1-2P-201ENST00000516688 293 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AC109635.4-202ENST00000531666 412 ntBASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.88□□□□□ -2.11
RGPD3A6NKT7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.88□□□□□ -2.11
RGPD3A6NKT7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
RGPD3A6NKT7 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 MIR144-201ENST00000384886 86 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 AL034374.1-201ENST00000406329 351 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.87□□□□□ -2.11
RGPD3A6NKT7 HMGN2P18-201ENST00000450680 270 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RGPD3A6NKT7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RGPD3A6NKT7 NBEAP1-201ENST00000554452 979 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 GLUD1P4-201ENST00000590914 418 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms